Transcript Information: S_Transcript_525571.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76860653386803
Replicate 20.079649059774422
Replicate 30.19974082401011
Condition 2: 8 Hour
Replicate 10.15397393730782
Replicate 20.56535357573316
Replicate 30.38476259214768
Condition 3: 24 Hour
Replicate 10.078862395272903
Replicate 20.16363762871009
Replicate 30.45527155965914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525571.p2 GENE.S_Transcript_525571~~S_Transcript_525571.p2 ORF type:3prime_partial len:277 (+),score=35.20,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|9.1e-21,zf-RVT|PF13966.2|1.6e+04 S_Transcript_525571:3970-4797(+)
ATGTGCAGAAGTTTTCTATGGAGTAATAAGGAGGGGAATGCAAAAGGCCTGGTCCCAATAGCTTGGCAGAATGTTTGTGCACCAAAGGCTGAAAGGGGTCTGGGATTATTTGATATGCTGCACTGGAACTTAGCAGCTATGTGCAAATTAATTCATTCTATTGAAATCCAGCATGATTCAAGTTGGACTGAGTGGTGCAGGGCATACTATCTCAGGAATAGAAGCATTTGGCAAACTGAAAAGAAGCAAGGTACATCTTGGGTGTGGAGGAATTTAATTACAGTAAAGGATGCAATAGTAGAGAGATATGGGAATATTAATGCAGCAAAAGAAGTTATGTCAGCATGTTGCAAAGGTGACAAGTTCTATATTCAGAAGATGTACGATACATGGAGGAATAAAAGGAGTCGAATGGACTGGACAAAACTGGTGTGGTCATCTTGTGCAATGCCAAAGGCTAAATTTATCTCTTGGCTAGCTATGTATGACAGGCTTAAAACCAGAGATAGACTAAAGAAGATGGGAGTGATACAAGATGATCAGTGCTTATTATGTAAAGGACAAAGCGAGTCAAGTGCTCACTTATTTTTTTCATGCCCAGTGAGTGCTGAAATTTGGAAGCATTTACTCAGGTGGACTGGTGAAATAAGGAAGCCTTATAGCTTGAAGAAAGAGATCAAATGGTTTGTGCATAGAAGAAGGAATAAAACTATGATCCAGCATACCAGGCGATCACTATTAGTGCTTGCTATTGCTGAAATTTGGTATGAACGAAACCTCAGGCTGTTCCAAGTGACTTCAAGACCAGTTGAACATATAGTGAAGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525571.p2 GENE.S_Transcript_525571~~S_Transcript_525571.p2 ORF type:3prime_partial len:277 (+),score=35.20,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|9.1e-21,zf-RVT|PF13966.2|1.6e+04 S_Transcript_525571:3970-4797(+)
MCRSFLWSNKEGNAKGLVPIAWQNVCAPKAERGLGLFDMLHWNLAAMCKLIHSIEIQHDSSWTEWCRAYYLRNRSIWQTEKKQGTSWVWRNLITVKDAIVERYGNINAAKEVMSACCKGDKFYIQKMYDTWRNKRSRMDWTKLVWSSCAMPKAKFISWLAMYDRLKTRDRLKKMGVIQDDQCLLCKGQSESSAHLFFSCPVSAEIWKHLLRWTGEIRKPYSLKKEIKWFVHRRRNKTMIQHTRRSLLVLAIAEIWYERNLRLFQVTSRPVEHIVKR

Click here to download the sequence:
Link to NCBI Protein BLAST