Transcript Information: S_Transcript_52569.p1


Annotated TAIR IDAT3G19850.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6898383-6901157 | Reverse length=554
E-Value6E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9282913980457
Replicate 25.2836453956508
Replicate 36.2669491546215
Condition 2: 8 Hour
Replicate 16.694378190168
Replicate 26.5884732239972
Replicate 35.7256160233445
Condition 3: 24 Hour
Replicate 13.7468570388398
Replicate 22.1270243874242
Replicate 31.7141195226778


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52569.p1 GENE.S_Transcript_52569~~S_Transcript_52569.p1 ORF type:complete len:309 (+),score=64.05,BTB|PF00651.27|4.6e-06 S_Transcript_52569:134-1060(+)
ATGGCAGACCTTTGCGATCTCCAAATCCATGTCAATGGCCAGCAAATATTCTTCCTCAATAAGGATATTCTGTCAGCATACTCAGGGAGGCTCAGAAAATTGATAAAGCAAGAAAAGAAGAAGGCCCAAATAGAGAATTTATCAATAACCCTTGAAGAATTCCCAGGAGGGGGAGATGGGTTTGAGCTAGTTTCAAGGTTTTGTTACAACAGTGGTAGAATTCCAATCACTTTATCGAATGTCTCAGTTCTCTATTGTGCTGCAATTTATCTGGGAATGACAGATAAAATGACAATTAGTTGCAGTAGTAACCTGATGGAGCAAGCTGACAATTATCTTGAAGGAATGTTCTATTGGAGTTGGGGTGATGTTCTTGTTTGTCTCAAAACCTGTGAACCCTTCTTTTCATATTCTGATTCCTGTGGTCTTATTGATAAGCTTATCACCACTTTGTTGGCTAAAATTGCTCAAAATTCTGATATTTCCCTTTTGTGTTCCTCCAATTCTTCTTCTTCCTCCTCTCCTAGCTCAGCTACCAAAAGGATTAGTAGTAATACTAATAATAGCATTAATAATAATAGTGGTAATAATAAGGCATGGTGGTTTGATGATTTGGGGACACTTTCCCCAATGATGATTGAGAAGGTGATAAGAAATTTAGGGGCATATGGGAGTGAAAATAACAGCCTACTTCTTACAAAGTTCTTGCTTCATTACTTGAAAAAAAGCACAAGTCAATGCAAGAAAAATGATGGGGTTGATAATTACTACACATACTCAAAATCAAATTATAGTGGACTTGCTGATACAGCTGTTTATGGGGTGGTTTTGATGGGGAAGACAGGGTTTTTCTTGCAGGGCATTATTTTGGGTATTAAGGCTGGTTTCTGGATTGGGGTTAAGCAAAGTTTGCAGAACTGGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52569.p1 GENE.S_Transcript_52569~~S_Transcript_52569.p1 ORF type:complete len:309 (+),score=64.05,BTB|PF00651.27|4.6e-06 S_Transcript_52569:134-1060(+)
MADLCDLQIHVNGQQIFFLNKDILSAYSGRLRKLIKQEKKKAQIENLSITLEEFPGGGDGFELVSRFCYNSGRIPITLSNVSVLYCAAIYLGMTDKMTISCSSNLMEQADNYLEGMFYWSWGDVLVCLKTCEPFFSYSDSCGLIDKLITTLLAKIAQNSDISLLCSSNSSSSSSPSSATKRISSNTNNSINNNSGNNKAWWFDDLGTLSPMMIEKVIRNLGAYGSENNSLLLTKFLLHYLKKSTSQCKKNDGVDNYYTYSKSNYSGLADTAVYGVVLMGKTGFFLQGIILGIKAGFWIGVKQSLQNWA*

Click here to download the sequence:
Link to NCBI Protein BLAST