Transcript Information: S_Transcript_52574.p1


Annotated TAIR IDAT3G19850.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6898383-6901157 | Reverse length=554
E-Value4.6E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1850182903365
Replicate 27.1135344399843
Replicate 37.4857586722307
Condition 2: 8 Hour
Replicate 18.586000029484
Replicate 210.764850245629
Replicate 37.2913455801
Condition 3: 24 Hour
Replicate 13.4680093266573
Replicate 24.0060419807619
Replicate 34.1692741160667


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52574.p1 GENE.S_Transcript_52574~~S_Transcript_52574.p1 ORF type:complete len:611 (+),score=130.33,NPH3|PF03000.10|6.9e+03,NPH3|PF03000.10|2.1e-57 S_Transcript_52574:113-1945(+)
ATGCAAAAAACCATATCAATGGCAGACCTTTGCGATCTCCAAATCCATGTCAATGGCCAGCAAATATTCTTCCTCAATAAGGATATTCTGTCAGCATACTCAGGGAGGCTCAGAAAATTGGTAAAGCAAGAGAAGAAGAAGGCCCAAACAGAGAATTTATCAATTAGCCTTGAAGAATTCCCAGGAGGGGGAGATGGGTTTGAGCTAGTTTCAAGGTTTTGTTATAACAATGGTAGAATTCCAATCACTGTATCGAATGTCTCAGTTCTCTATTGTGCTGCAATTTATCTGGGAATGACAGATAAAATGACAATTAGTTGCAGTAGTAACCTGATGGAGCAAGCTGACAATTATCTTGAAGGAATGTTCTATTGGAGTTGGGGTGATGTTCTTGTTTGTCTCAAAACCTGTGAACCCTTCTTTTCATATTCTGATTCCTGTGGTCTTATTGATAAGCTTATCACCACTTTGTTGGCTAAAATTGCTCAAAATTCTGATATTTCCCTTTTGTGTTCCTCCAATTCTTCTTCTTCCTCCTCTCCTAGCTCAGCTACCAAAAGGATTAGTAGTAATACTAATAATAGCATTAATAATAATAGTGGTAATAATAAGGCATGGTGGTTTGATGATTTGGGGACACTTTCCCCAATGATGATTGAGAAGGTGATAAGAAATTTAGGGGCATATGGGAGTGAAAATAACAGCCTACTTCTTACAAAGTTCTTGCTTCATTACTTGAAAAAAAGCACAAGTCAATGCAAGAAAAATGATGGGGTTGATAATTACTACACATACTCAAAATCAAATTATAGTGGACTTGCTGATACAGCTGTTTATGGGGTGGTTTTGATGGGGAAGACAGGGTTTTCTTGCAGGGCATTATTTTGGGTATTAAGGCTGGTTTCTGGATTGGGGTTAAGCAAAGTTTGCAGAACTGGGCTTGAGAAGCTGATTGGAAGTATGCTTGATTTGGCAAAATTGGATGATTTATTGGTATCTTCAATTGATGGTGATGGTGGGGGTGTTTATGATGTTAATTTGGTGGTTAGATTGATTAGGGTTTTTGTTCAATGTGAAGGAGTTTCATTGCCCAGATTGAAGAAAGTTGGTTGGTTGATTGATCAGTATTTGGCAGAAATTTCTCCTGATCATAATCTTAAGATTTCTAAGTTCATGGGAGTTGCTCAGAGCCTACCAGATTTAGCTAGGGATTGCTTTGATGGGGTCTATAGAGCCATTGACATTTACCTTGAGTCTCATCCAACTCTGTCATTCGAAGAACGATCAAGATTATGTCGATGTCTAAACTACGAGAAGTTATCCCTAGAAGCATGCAAGGACCTGGCCAAGAACCCTAGGATCCCTCCAAGGGTTGCAGTCCAAGCAATGGCCTCTCAGAGACATTATGTAAATTATGAGCCACCCACAAAAACAGAGCAATTGGAGTATTATTCCCCCATAAATCATCGAACCAACAAACAAATTGTCTTCTATAAGAAAGGATCCTTATCACATCGTGATCATGGTCGTTATGATCACGATGATGATCACGATGATGATCATGATCATGATAATGATGATCATCACGGCGATGACGATGATGAATATCATTATCATGATCATGAAGAAGATGAAGAAGAAGAAGAAAGCAATGTCTCAGGAGGTGGAAGTGAAGATATGAAACTGAATATACAAAGAATGCAATGGAGAGTGTTGGAGTTGGAGAAGATGTGTAAGGAGATGAAAGGCCAAATGACCAAACTTGTGAGGCATAAAAATCATAATAAATCCTTCAGCTCCCCTGCACATAATAGACCACCTAGACTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52574.p1 GENE.S_Transcript_52574~~S_Transcript_52574.p1 ORF type:complete len:611 (+),score=130.33,NPH3|PF03000.10|6.9e+03,NPH3|PF03000.10|2.1e-57 S_Transcript_52574:113-1945(+)
MQKTISMADLCDLQIHVNGQQIFFLNKDILSAYSGRLRKLVKQEKKKAQTENLSISLEEFPGGGDGFELVSRFCYNNGRIPITVSNVSVLYCAAIYLGMTDKMTISCSSNLMEQADNYLEGMFYWSWGDVLVCLKTCEPFFSYSDSCGLIDKLITTLLAKIAQNSDISLLCSSNSSSSSSPSSATKRISSNTNNSINNNSGNNKAWWFDDLGTLSPMMIEKVIRNLGAYGSENNSLLLTKFLLHYLKKSTSQCKKNDGVDNYYTYSKSNYSGLADTAVYGVVLMGKTGFSCRALFWVLRLVSGLGLSKVCRTGLEKLIGSMLDLAKLDDLLVSSIDGDGGGVYDVNLVVRLIRVFVQCEGVSLPRLKKVGWLIDQYLAEISPDHNLKISKFMGVAQSLPDLARDCFDGVYRAIDIYLESHPTLSFEERSRLCRCLNYEKLSLEACKDLAKNPRIPPRVAVQAMASQRHYVNYEPPTKTEQLEYYSPINHRTNKQIVFYKKGSLSHRDHGRYDHDDDHDDDHDHDNDDHHGDDDDEYHYHDHEEDEEEEESNVSGGGSEDMKLNIQRMQWRVLELEKMCKEMKGQMTKLVRHKNHNKSFSSPAHNRPPRLC*

Click here to download the sequence:
Link to NCBI Protein BLAST