Transcript Information: S_Transcript_526022.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16227439777549
Replicate 20.53811681847597
Replicate 30.3373671234805
Condition 2: 8 Hour
Replicate 10.26006573557479
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_526022.p1 GENE.S_Transcript_526022~~S_Transcript_526022.p1 ORF type:internal len:164 (-),score=15.19,RVT_1|PF00078.23|6.6e-23 S_Transcript_526022:2-490(-)
CTCAAAGTTATTCTTCCCGAGATTATTGCTCCTAATCAAAGTGCATTCACCCCCGGGCGACTGATAACTGATAATATTTTGGTGTCTTTTGAGACCTGTCATTTCATGAAAAATCTTGAGTCTAGTGAGGGTTATGCGGCGTTGAAGTTGGACATGACCAAGGCTTATGATAGGGTGGAGTGGTCCTTTTTGCAAAAAGTATTGCTGAAATTGGGTTTTGACAATAGATGGGTGGATCGTGTGATGCTTTGTGTCACCTCGGTCTCTTTTGCCGTTCTTCTTAATGGGAAACCTACTGCGACCTTTCTCCCATCTAGAGGGTTGCGGCAAGGCGACCCGATTTCACCGTATTTATTTTTGTGTGTTACAGAAGCTTTTTCGGGACTCATTCGAAGGGCGGAGATGGATAGTCTTTTGCAGGGGGTTCGAGTGTGCGGAGGTGCACCTTCCATCACTCACTTATTTTTTGCTGACGACAGCCTCATTTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_526022.p1 GENE.S_Transcript_526022~~S_Transcript_526022.p1 ORF type:internal len:164 (-),score=15.19,RVT_1|PF00078.23|6.6e-23 S_Transcript_526022:2-490(-)
LKVILPEIIAPNQSAFTPGRLITDNILVSFETCHFMKNLESSEGYAALKLDMTKAYDRVEWSFLQKVLLKLGFDNRWVDRVMLCVTSVSFAVLLNGKPTATFLPSRGLRQGDPISPYLFLCVTEAFSGLIRRAEMDSLLQGVRVCGGAPSITHLFFADDSLIF

Click here to download the sequence:
Link to NCBI Protein BLAST