Transcript Information: S_Transcript_52606.p1


Annotated TAIR IDAT1G08260.1
Annotated Gene NameDNA polymerase epsilon catalytic subunit
Annotated Gene Symbol(s)EMB142, EMB2284, POL2A, TIL1, EMB529, ABO4, ESD7
Annotation TypeOrtholog
Chromosome Positionchr1:2590944-2606892 | Forward length=2161
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5786300029615
Replicate 25.3647824563948
Replicate 35.0868093787513
Condition 2: 8 Hour
Replicate 15.3172310367079
Replicate 25.7459911334161
Replicate 37.3655378087822
Condition 3: 24 Hour
Replicate 13.4223008116332
Replicate 24.3207266553319
Replicate 35.4206247243122


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52606.p1 GENE.S_Transcript_52606~~S_Transcript_52606.p1 ORF type:complete len:2266 (+),score=437.95,DUF1744|PF08490.8|2.5e-121,DNA_pol_B_exo1|PF03104.15|2.5e-80,DNA_pol_B_exo1|PF03104.15|3.3e+03,DNA_pol_B|PF00136.17|1e-20,DNA_pol_B|PF00136.17|4.3e+02 S_Transcript_52606:341-6799(+)
ATGGACAGTTGTGTAGATTTGTATTTTGTTACTCAGGAAGGGACTAGTTTTAAGGCGAAGTACAGATTTCGGCCATATTTTTATGCGGCCACTAAAGATAATATGGAAACTGATGTAGAAGCGTATCTAAGAAGGCGATACGAAAATGAAATAGCTACTGTAGAAATTGTAGAGAAGGAAGACCTTGATCTTAAAAATCACTTATCTGGGCTACGGAAGTCATACTTGAAGATATCATTCAATACTGTCCAGCAATTAATGCATGTGAGGAATGATCTGTTACGTGTAGTTGATAGAAACCAAGAAAAGTTTGAAGCAGCTCAAGCTTATGAGTCCATCATAACGGGAAAGAACCAGCAAAGACCTCAAGATTTTCTAGACTGCATCACTAACCTTCGCGAGTATGATGTTCCTTATCATGTTCGATTTGCCATTGACAATGATGTGAGGTGTGGACAATGGTATGACGTTACTGTATCTAGCACTGGCATTGAGCTTCATAAGAGGATTGATCTTCTTCAACGTGCTGAAGTTCACGTCTGTGCATTTGATATAGAGACTACAAAGCTTCCTCTGAAATTTCCAGATGCCGAGTATGATCAAATAATGATGATCTCATATATGGTTGATGCACAAGGATATTTGATTATAAACAGAGAGTGTGTAGGTGAAGATATAGAGGATCTGGAATACACTCCAAAGCCAGAATTTGAGGGATGTTTCAGGGTTAAAAATGTGAAAAATGAGGAAGTGCTTCTGAGATGCTGGTTTTCTCATATGCAAGAAGTAAAACCTGGCATTTATGTCACGTACAATGGTGATTTCTTTGACTGGCCATTTGTGGAACGAAGAGCAGCCCATTATGGTCTGAAAATGAGTGATGAGATTGGCTTTCAGTGCGACACAGTTCAAGGTGAATGCCGTGCCAAGTTTTCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGTGACAGTTATCTCCCTCAGGGCAGTCATGGCTTGAAGGCTGTTACCAAGGCCAAATTAGGTTATGACCCACTGGAGGTAAATCCTGAAGACATGGTTCGTTTTGCAAAAGAAAAGCCTCAGATGATGGCCTCTTATTCTGTTTCTGATGCTGTTGCAACTTATTACTTGTACATGACCTATGTTCATCCTTTCATATTCTCCCTTGCTACTATAATACCCATGCCACCAGATGAGGTTTTGCGGAAAGGAAGTGGAACTCTATGTGAAATGCTTCTTATGGTCCAGGCATTCAAGGCAAATGTTGTCTGTCCTAACAAACACCAGTCTGAATCGGAAAAGTTCTACAACAATAAACTTTTGGAGAGTGAGACCTACATTGGTGGTCATGTGGAATGCCTTGAAAGTGGTGTTTTTAGATCTGATCTTCCTACTAGTTTTAAACTTGAACCATCTGGTTATCAGCAACTGGTTGACAATCTTGATCGTGATCTGCAATATGCTATTAAAGTGGAGGGTAAAATGGACTTGGATTCAATCTCAAATTATGATGAAATCAAGGCCGCTATCAAAGAAAAGCTGGTTTCCTTACGAGATGAACCTGTGCGTGATGAATGTCCCCTCATATACCATTTGGATGTGGCTGCTATGTATCCAAATATTATCCTGACAAACAGGCTTCAGCCCCCGTCAATTGTTACAGATGAGGACTGCACTGCATGTGATTTTAATCGACCTGGAAAAACTTGTCTTCGGAAACTTGAATGGGTTTGGCGTGGAGAAACATACATGGCAAAGAAAAGTGACTATTACCATTTGAAGAGGCAAATTGAATCTGAGATGGTAGATAGCACTGAGGGGCAATCATCTAAATCATTTCTTGAACTCCCCAAGGCAGAGCAACAATCAAAGTTAAAGGAACGTCTTCGAAAATATTGTCAGAAGGCATATAAACGGGTTCTTGACAAGCCAGCAACTCAGCTTCGTGAAGCCGGAATCTGCATGAGGGAAAATCCATTCTATGTTGATACTGTCCGTAGCTTTCGAGATAGAAGGTATGAATATAAAGGGCTCAATAAAGTCTGGAAGGCAAAGTTATCTGAAGCAAAAGCAAGCGGAAATCCCATCAAGATCCAGGAAGCTCAGGATATGGTTGTCGTGTATGATTCACTGCAGCTTGCTCATAAATGTATTCTCAATTCCTTCTATGGATATGTGATGCGCAAGGGTGCAAGGTGGTACTCCATGGAAATGGCTGGGGTTGTCACCTATACAGGAGCCAAAATCATCCAAAATGCTCGTGTATTGGTTGAGAAGATTGGTCGACCACTTGAGTTAGATACAGATGGAATCTGGTGTGCACTACCTGGATCATTCCCGGAGAACTTTACCTTTAAAACAAAAGACTCAAAGAAGCTGACAATCTCTTATCCTTGTGTTATGCTTAATGTGGATGTAGCAAAAAATAATACAAATGATCAATACCAGACACTGAAAGATCCTGTTAATAGAATATACGCAACTCATAGCGAATGCTCAATTGAATTTGAAGTCGATGGTCCTTACAAGGCGATGATTCTTCCAGCATCAAAAGAAGAAGGTATACTCATCAAGAAACGTTATGCAGTTTTTAATGATGATGGAACACTGGCAGAACTTAAAGGTTTTGAGATAAAGCGCAGAGGTGAGCTTAAGCTCATAAAAGTTTTCCAGGCTGAGCTGTTTGACAAATTTCTACATGGGTCGACCTTGGAAGAATGCTATGCTGCTGTTGCTAATGTTGCAAACCGCTGGCTTGATCTTCTTGAGAATCGAGGGAAAGATATAGCTGATAGTGAACTGCTGGATTACATTTCTGAGTCAAGCACCATGAGCAAATCTTTAGCAGACTATGGTGAACAGAAGTCTTGTGCAGTGACTACTGCTAAGCGCCTAGCTAATTTTCTTGGAGATACTATGGTTAAAGATAAAGGCCTGTTGTGTCAGTATATTGTTGCTTGCGAGCCAAAGGGAACACCAGTAAGCGAGCGAGCTCTTCCGGTTGCAATATTTGAGACTGAAAATGAAATTATGAAATTCTATGTGCGGAAGTGGTGCAAGATTTCATCAGATGTTGGGATTAGATCCATCATTGATTGGTCTTATTACAAGCAGCGGCTGAGTTCAGCTATTCAGAAAATTATCACCATCCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTACCCAGGGTGGTTCATCCTGACTGGTTGCACAAGAAGGTTCGGGAGAAGGAGGACAAATTTCATCAGAGGAAGATAAAGGATATATTCAGCTCTTCAAAGCGAGATGAGAGAGCCAAGATTGATGATGCCAATGCCTCTCCTGATAATGGGTTAGATAATCACAAAGTTCAAGATTTAGAGGATATTGGTAAATTGGATGGACATGGAGTTGGCCATAGACCTGTGGTTCATAGTTATGAAGTTAATGGCAGAGATCCACTGCAGAGAACCACCTTGCACCACCAAAGTAATCAGCAAAGAATGGATCTTCAGAGTATTAGCTGTATCGAAGAAGTAGATAGGAGTGTCGACTATCAGGGATGGCTTGTGCAGAAGAAACGGAAGTGGAAGGAAAACCGAGAGAAAAGGAAGAGACAAAGGTTGTGCAATGGAAAAACATCAAAGCATGCTGCTGCCAATTCCGAGCTGCATGAAAACTCTATAATTCAGAAAAGAAGCCTGGGAAGAACTGGTGTTAGTTCATACTTCAAGAGGCAAGATTTGTCCCTCACAAACTGCTATTGGCAGATTTTGCAGCTGGTCCCAAGTGATAAGCCTGGTCAATTCTTTGCTTGGGTAATTGTGGAAGGAAGCATGTTTAAAATTCCCATCAGTGTTCCTAGAGTGTTCTATCTTAACTCCAAAGCTCCAATAACAGAAGAATTTCCTGGAAGACGTGTTAACAAGATTCTTCCTCATGGACACCACAGCTGTTCCCTGATTGAGATAACCATTGATGAGGAAGAGTTCAGAGCAGAAAGAAGGAGACTTGCAGCTCATCTTGCAGATCCAGAAATTGAGGGAATATACGAAACGAAGTTGCCACCAGAATTTAATGCTATCCTCCAGATTGGATGTGTGTGTAAAGTAGATAAAAAAGCCAATAAACGAAATGTTCAATCTGCTTGGAACCTGAATGAATTACATATGAAGACTACAACAGAATGTCAGTATCTGGAGCTGTCCCTCTCTTTCTTTTACTTATACCACAGCTGCTGTGAAGGACGAGCGGTATATGGAGGATTTTTCCCTTTATCTAATTTGATATATTTTGTTGCGGTTGATCCTCACCAGAACAAAGGGCTGAATCCTACTACCATTAAAAGATTTTATTCTGAAGCCTGCCAAGCATTATCTATAGAACCTCCTCTTCCTCAAGGGATTATCACATACAAGGTGGATTATGTTCTGCAATATGATGAGGCTGAAAGGATTATGCAGAGAACTATAACTGAGCACAGAGCACACAATAACAGACCCGGGCTTGCTGTAATCGAGTGCCCAAATGTTCAGCGTCTAAAGTCGGGTATACAAGCATTACATGATCTTCCATGCGTAAGCATCCCTGCTAATGCTCGTGATAGTCACTATCAGGCTATTGGCTGGCAAACTGTGGCTGCGAAAATTGCATTGCAGAGATGTGCTGCATCATCCCAGTGGCTGCAAGAGAGAATCTCTCTGTCTAGATATGCCCATGTACCCCTGGGGAACCTTGAACTAGATTGGCTTATACACACTATTGATGTCTTTTTTTCAAGAGCATTACGTGAGAAGCAACAGGTACTTTGGGTTTCTGATGATGGTGTTCCAGATCTGGGCGGCTTTAGTGAAGATGATGCATGCTTTGTTGACGAGGTCAACCAGCCAGTTCTTGTTTACCCTGGAGCATATAGAAAGGTTTCTGTTGAGTTAAAGATTCATCACTTGGCTGTTAATGCTCTTCTGAAAAGCAGTCATATTAATGAAATTGAGGGCAGCAGTTTATTTGGATTTGAGCAAGATATGGAATCTGATGTTGCGTGCAGTGAACAATATGGTTTTGATGAGGCTACCTCCTGTGGGCCTGCTTTCCGAGTCCTGAAACAGCTAGTACAAAGATGCCTTCAAGATGCAGTTACATCAGGAAATGTTTTTGCCGATGCAATATTACAACATCTTTATCGCTGGCTTTGCAGCCCACAATCAAAGCTTCATGATCCTGCTCTTCATAGAATGCTTTGCAAGGTAATGCAAAAGGTGTTTGCATTACTGTTGGCAGAGTTCCGCAAGTTGGGTGCCACAGTCATTTTTGCAAACTTTTCAAAATTAATTTTAGACACTGGAAAGGCAGATTTATCTTCAGCGAGAGCTTATTGTGATAGCTTGCTTAAAGCAATACAGACAAGGGACTTGTTTGAATGGATCGAGATCGAGCCACTACACTTCTGGCACTCCTTGCTCTTTATGGATCAGTACAATTATGGCGGGATCCAGGAGAAAGACCGTGAAGCACCCACCAGCAGTTCTGCATTTTCTAGTGGAAGTTCACATGATGATCTTCAAGTGGACATTGTGTCAAGTTGGAATATTGCAGACCACTTACCCAAGGCTACTCAAGATCATTTTGTTGTGATTGTCTCTGAGTTTATGTACAAGCCATGGGAGTATGCTCTGAATCATGCCACCAAAGAAACTATTCTAGAAGATGGCAACTTATGCACACCATCAATCACAGCTCCCATAGCTGAAAAGTTGGAGTCACGTATGATTGAATATCTCAAAGATCAGATCAGCTCTTACTTTACGGATAAACTTCTTGTCATTGTTCGCGAAATATTACATAATTCAAAAGGAACGAAGAGGCCCCACGATGATGATGAATTGTCACAACAAATAGATCCTCAGCTTGCTGGCATTGTCCATACTGGGGATGCGGCATTAGAGTTTATTAAACATGTCTTTGCTGTTTTGGCTTTGGACCAAAATATTCAGCACGATGTGCTGGTCATGAGAAGGAATGTGTTAAGATACATACGTGTGCGGGAGTTTGCTCCAGAAGCTGAATTTTCTGCTTCCTCACCATCCTTTACACTACCAAACATCATTTGCAGCTATTGCAATGATGTGCGAGATCTAGACTTGGGACGGGATCCATCATTACTTGCACAGGAGTGGCGATGTGCAGTGCCACAATGTGGGCATCCTTATGATAGAGAGATGATGGAGAACTCTCTTCTTCAGATTGTACGGCAAAGGGAACGTCTTTACCATTTGCAGGACTTGGTGTGTGTAAAGTGCCATATGATGAAGGATCGTCACTTAACCGAGCAGTGTACATGTGCCGGTCCATTTAAGTGCCTTGAAGATGCTTCCGAGTTTCGCAGAAAAATGCAAATTTTTCATAAAATAGCAGTTGAACAGAATTTTGAACTGTTGAAAGAATGCGTCTCTTGGATTCTGGAAATCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52606.p1 GENE.S_Transcript_52606~~S_Transcript_52606.p1 ORF type:complete len:2266 (+),score=437.95,DUF1744|PF08490.8|2.5e-121,DNA_pol_B_exo1|PF03104.15|2.5e-80,DNA_pol_B_exo1|PF03104.15|3.3e+03,DNA_pol_B|PF00136.17|1e-20,DNA_pol_B|PF00136.17|4.3e+02 S_Transcript_52606:341-6799(+)
MDSCVDLYFVTQEGTSFKAKYRFRPYFYAATKDNMETDVEAYLRRRYENEIATVEIVEKEDLDLKNHLSGLRKSYLKISFNTVQQLMHVRNDLLRVVDRNQEKFEAAQAYESIITGKNQQRPQDFLDCITNLREYDVPYHVRFAIDNDVRCGQWYDVTVSSTGIELHKRIDLLQRAEVHVCAFDIETTKLPLKFPDAEYDQIMMISYMVDAQGYLIINRECVGEDIEDLEYTPKPEFEGCFRVKNVKNEEVLLRCWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHYGLKMSDEIGFQCDTVQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAFKANVVCPNKHQSESEKFYNNKLLESETYIGGHVECLESGVFRSDLPTSFKLEPSGYQQLVDNLDRDLQYAIKVEGKMDLDSISNYDEIKAAIKEKLVSLRDEPVRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEDCTACDFNRPGKTCLRKLEWVWRGETYMAKKSDYYHLKRQIESEMVDSTEGQSSKSFLELPKAEQQSKLKERLRKYCQKAYKRVLDKPATQLREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKAKLSEAKASGNPIKIQEAQDMVVVYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEKIGRPLELDTDGIWCALPGSFPENFTFKTKDSKKLTISYPCVMLNVDVAKNNTNDQYQTLKDPVNRIYATHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYAAVANVANRWLDLLENRGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLANFLGDTMVKDKGLLCQYIVACEPKGTPVSERALPVAIFETENEIMKFYVRKWCKISSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFHQRKIKDIFSSSKRDERAKIDDANASPDNGLDNHKVQDLEDIGKLDGHGVGHRPVVHSYEVNGRDPLQRTTLHHQSNQQRMDLQSISCIEEVDRSVDYQGWLVQKKRKWKENREKRKRQRLCNGKTSKHAAANSELHENSIIQKRSLGRTGVSSYFKRQDLSLTNCYWQILQLVPSDKPGQFFAWVIVEGSMFKIPISVPRVFYLNSKAPITEEFPGRRVNKILPHGHHSCSLIEITIDEEEFRAERRRLAAHLADPEIEGIYETKLPPEFNAILQIGCVCKVDKKANKRNVQSAWNLNELHMKTTTECQYLELSLSFFYLYHSCCEGRAVYGGFFPLSNLIYFVAVDPHQNKGLNPTTIKRFYSEACQALSIEPPLPQGIITYKVDYVLQYDEAERIMQRTITEHRAHNNRPGLAVIECPNVQRLKSGIQALHDLPCVSIPANARDSHYQAIGWQTVAAKIALQRCAASSQWLQERISLSRYAHVPLGNLELDWLIHTIDVFFSRALREKQQVLWVSDDGVPDLGGFSEDDACFVDEVNQPVLVYPGAYRKVSVELKIHHLAVNALLKSSHINEIEGSSLFGFEQDMESDVACSEQYGFDEATSCGPAFRVLKQLVQRCLQDAVTSGNVFADAILQHLYRWLCSPQSKLHDPALHRMLCKVMQKVFALLLAEFRKLGATVIFANFSKLILDTGKADLSSARAYCDSLLKAIQTRDLFEWIEIEPLHFWHSLLFMDQYNYGGIQEKDREAPTSSSAFSSGSSHDDLQVDIVSSWNIADHLPKATQDHFVVIVSEFMYKPWEYALNHATKETILEDGNLCTPSITAPIAEKLESRMIEYLKDQISSYFTDKLLVIVREILHNSKGTKRPHDDDELSQQIDPQLAGIVHTGDAALEFIKHVFAVLALDQNIQHDVLVMRRNVLRYIRVREFAPEAEFSASSPSFTLPNIICSYCNDVRDLDLGRDPSLLAQEWRCAVPQCGHPYDREMMENSLLQIVRQRERLYHLQDLVCVKCHMMKDRHLTEQCTCAGPFKCLEDASEFRRKMQIFHKIAVEQNFELLKECVSWILEIR*

Click here to download the sequence:
Link to NCBI Protein BLAST