Transcript Information: S_Transcript_52635.p1


Annotated TAIR IDAT5G14890.1
Annotated Gene NameNHL domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4818056-4821534 | Forward length=754
E-Value5E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.263500754832
Replicate 217.860353451322
Replicate 315.149390354386
Condition 2: 8 Hour
Replicate 115.570919914097
Replicate 216.423777771228
Replicate 315.310192128975
Condition 3: 24 Hour
Replicate 110.055581289321
Replicate 28.5438972212421
Replicate 313.311634547145


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52635.p1 GENE.S_Transcript_52635~~S_Transcript_52635.p1 ORF type:5prime_partial len:252 (+),score=-10.86 S_Transcript_52635:3-758(+)
CACTCAAAAACCCTCAAATCTCATTATCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCAAATCCATCCCCTATCCCCACCGGAACCTCCCGGTAACCAGTTCTTTCCCGTTACAACCTCCATATAAATACCATTCCCCTCTGGACCCTTTCTATCCATCCCCCTCTCTCTCTCAGCATCTCAGAGAGCCGCAAAAAAAAAAAAGAAGAAAACCACCCACCCAAAACCCGATGGGGAGCCAAGAACTCGAGTACCCGACCCGAATACCGATCGAAGAACTTGACGAATCCCCATCACACGCCTTCATCGCCCGCCACCGTTGCTGCTTCCACTTACCCTGTTTCGGATCTCCCCCAACAACCCACCGCCTTGGAGGGGGCCCCACCACCCCATCCTCCTCAAGGACGTCTTTCTGGGACCGAATCCGTACAGACGACTCAGACAACAAGTGGTGGGCCCGTCCCCTCCGCGCCTTATGGAAGCTTCGTGAGTGGTCGGAGATCGTCGCCGGTCCGAAGTGGAAAACCTTCATCCGCCGGTTCAACCGGAGCAAGAGCCGCCACCAGACCATCCAAGGGAAATTCCAGTACGACCCCCTAAGTTACGCTCTGAACTTCGACGAAGGGCAGAACAGTCATTTCGACGATGAGTACGGCCAGTTCCCCGATTTCTCCTCCAGATTCGCCGCCGTTCCTCACTCTTCTAAGTCATCAATGGATTTGGGTAACGGCTATGGTGGGGCCCCTGCCGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52635.p1 GENE.S_Transcript_52635~~S_Transcript_52635.p1 ORF type:5prime_partial len:252 (+),score=-10.86 S_Transcript_52635:3-758(+)
HSKTLKSHYQKKKKKKKKTLKSIPYPHRNLPVTSSFPLQPPYKYHSPLDPFYPSPSLSQHLREPQKKKRRKPPTQNPMGSQELEYPTRIPIEELDESPSHAFIARHRCCFHLPCFGSPPTTHRLGGGPTTPSSSRTSFWDRIRTDDSDNKWWARPLRALWKLREWSEIVAGPKWKTFIRRFNRSKSRHQTIQGKFQYDPLSYALNFDEGQNSHFDDEYGQFPDFSSRFAAVPHSSKSSMDLGNGYGGAPAG*

Click here to download the sequence:
Link to NCBI Protein BLAST