Transcript Information: S_Transcript_52639.p2


Annotated TAIR IDAT5G14890.1
Annotated Gene NameNHL domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4818056-4821534 | Forward length=754
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0374835945176
Replicate 212.882299942978
Replicate 39.0357029134419
Condition 2: 8 Hour
Replicate 17.0130478224129
Replicate 29.3090913802889
Replicate 38.2974440341538
Condition 3: 24 Hour
Replicate 14.105078776756
Replicate 25.0195018927481
Replicate 36.7710186322459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52639.p2 GENE.S_Transcript_52639~~S_Transcript_52639.p2 ORF type:5prime_partial len:149 (-),score=7.10 S_Transcript_52639:412-858(-)
CCCCCCCTCTCTCTCTCTCAGAGCATCTCAGAGAGCCGCAAAAAAAAAAAAGAAGAAAACCACCCACCCAAAACCCGATGGGGAGCCAAGAACTCGAGTACCCGACCCGAATACCGATCGAAGAACTTGACGAATCCCCATCACACGCCTTCATCGCCCGCCACCGTTGCTGCTTCCACTTACCCTGTTTCGGATCTCCCCCAACAACCCACCGCCTTGGAGGGGGCCCCACCACCCCATCCTCCTCAAGGACGTCTTTCTGGGACCGAATCCGTACAGACGACTCAGACAACAAGTGGTGGGCCCGTCCCCTCCGCGCCTTCAGGAAGCTTCGTGAGTGGTCGGAGATCGTCGCCGGTCCGAAGTGGAAAACCTTCATCCGCCGGTTCAACCGGAGCAAGAGCCGCCACCAGACCATCCAAGGGAAATTCCAGTACGACCCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52639.p2 GENE.S_Transcript_52639~~S_Transcript_52639.p2 ORF type:5prime_partial len:149 (-),score=7.10 S_Transcript_52639:412-858(-)
PPLSLSQSISESRKKKKEENHPPKTRWGAKNSSTRPEYRSKNLTNPHHTPSSPATVAASTYPVSDLPQQPTALEGAPPPHPPQGRLSGTESVQTTQTTSGGPVPSAPSGSFVSGRRSSPVRSGKPSSAGSTGARAATRPSKGNSSTTP*

Click here to download the sequence:
Link to NCBI Protein BLAST