Transcript Information: S_Transcript_526467.p1


Annotated TAIR IDAT3G29230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:11188803-11190605 | Forward length=600
E-Value7.6E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1042739101735
Replicate 21.0985621356439
Replicate 31.5305175173112
Condition 2: 8 Hour
Replicate 12.1236903220381
Replicate 22.1350726917581
Replicate 32.3880825117614
Condition 3: 24 Hour
Replicate 10.81578403076908
Replicate 21.4106106790258
Replicate 31.6744925746135


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_526467.p1 GENE.S_Transcript_526467~~S_Transcript_526467.p1 ORF type:internal len:241 (-),score=50.17,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|0.05,PPR_2|PF13041.2|2.1,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|8.8e-09,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.1,PPR_1|PF12854.3|6.6e+03,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|1.8e-06,PPR_1|PF12854.3|9e-08,PPR_1|PF12854.3|7.9e-07,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.6,PPR_3|PF13812.2|80,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|9e-06,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|4.6e+02 S_Transcript_526467:3-722(-)
TTGATTGATAGTTATTCTAAGTGTGGGGCAATTGGTCTTAGTTCAGCTAGGAAACTGTTCATGTATATGGAGGATAGGGATATTGTTTCTTGGAATTCTATGATTAGTGGCTTGGTTAAAGGGGACAATTTGGAAGATGCTCGCCAACTGTTCGATGAAATGCCTGAGAGAGATGTTGTCAGCTGGAATACCATATTGGATGGATATGTTAAGGCAAATGACATGAACGCCGCATTCGATTTGTTTGAGAAGATGCCAGAGAGAAATGTGGTATCGTGGTCAACTATGGTTTCAGGTTATGCAAAGGTAGGAGATATAGAAATGGCTAGAATGTTGTTTGATAAGATGCCTGTAAAGAATTTGGTATCATGGACTATAATAATCTCTGCATATGCTGAGAAGGGAGTTGCAAAGGAGGCTACTGCCTTGTACAATGAGATGGAGAATACAGGACTGAAACCTGATGATGGGACAATTATCAGTATCCTAGCTGCTTGTGCAGAGTCTGGCTTGCTAGGACTAGGAAAGCGAGTTCATGGATCAATGCAAGCAACTAGATTTCGATGTAGTGTATCAGTGATTCATGCATTAATTGATATGTATACCAAATGTGGTAGCGTTGGAAAGGCATTGGAGATATTTGAAGGGATGGCAAAAAGAGATTTGGTTTCCTGGAATGCCATTATCCAAGGTTTAGCAATGCACGGACATGGAAAAACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_526467.p1 GENE.S_Transcript_526467~~S_Transcript_526467.p1 ORF type:internal len:241 (-),score=50.17,PPR_2|PF13041.2|0.88,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.2e-10,PPR_2|PF13041.2|0.05,PPR_2|PF13041.2|2.1,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|8.8e-09,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|5.5e-08,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.1,PPR_1|PF12854.3|6.6e+03,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|1.8e-06,PPR_1|PF12854.3|9e-08,PPR_1|PF12854.3|7.9e-07,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.45,PPR_1|PF12854.3|2.6,PPR_3|PF13812.2|80,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|9e-06,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|3.5,PPR_3|PF13812.2|4.6e+02 S_Transcript_526467:3-722(-)
LIDSYSKCGAIGLSSARKLFMYMEDRDIVSWNSMISGLVKGDNLEDARQLFDEMPERDVVSWNTILDGYVKANDMNAAFDLFEKMPERNVVSWSTMVSGYAKVGDIEMARMLFDKMPVKNLVSWTIIISAYAEKGVAKEATALYNEMENTGLKPDDGTIISILAACAESGLLGLGKRVHGSMQATRFRCSVSVIHALIDMYTKCGSVGKALEIFEGMAKRDLVSWNAIIQGLAMHGHGKT

Click here to download the sequence:
Link to NCBI Protein BLAST