Transcript Information: S_Transcript_52666.p1


Annotated TAIR IDAT5G20190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6814093-6815171 | Forward length=290
E-Value4.5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1108.41296292647
Replicate 2142.05339943172
Replicate 3110.85055056564
Condition 2: 8 Hour
Replicate 187.097383611027
Replicate 265.624089343198
Replicate 362.376901412472
Condition 3: 24 Hour
Replicate 1174.29917564074
Replicate 2153.39821940622
Replicate 3135.6680493791


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52666.p1 GENE.S_Transcript_52666~~S_Transcript_52666.p1 ORF type:complete len:285 (+),score=70.14,TPR_17|PF13431.2|0.00021,TPR_17|PF13431.2|0.96,TPR_17|PF13431.2|5.6,TPR_19|PF14559.2|0.00013,TPR_19|PF14559.2|1.6,TPR_12|PF13424.2|3.1e-06,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.021,TPR_1|PF00515.24|6.4,TPR_16|PF13432.2|1.4e-05,TPR_2|PF07719.13|4.5e+02,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|2.2,TPR_11|PF13414.2|0.014,TPR_11|PF13414.2|0.21 S_Transcript_52666:414-1268(+)
ATGCTACTAAGAAGCGCGTCAACGCCATTGCTAAACTCATGGGCCACCTCAAACATCGGGTCCGGGTCCAGCTCATCATCACCTGAAACTAAATCACTGATCTCCTTAGCGACGTCATCAAGCGTTACCTACACCCCTAACAACAACCCCATCTCTAGGATGTGCCGGGCTTCCTCAGAATCCGATCTCCGCCACCTCAGCACCGTCCCTACCAAGCGGGCCCCATTCGGGTCGGGCCCTGGCTTGATGGGGAGAAAGGGATTCGGGTTGGTGGAAGTAGAGGAGGAGGAGGAAGGGTGTGAGTGTGACGTGGCGGCGGAGGAGAGAGAAAGAGAGAGGTTGGGTTTGGGGTTGTTGACTGGTGGTGGAGGGGGTTGTGGTGGTGGAAGTGGTGATGGGTTTGGGTATGGGAATTGGGATTCGGATTCGGATCCAAGTAGTAGTACTGATTTGTATTATCAGAAGATGATTGAGGCTAATCCTGGCAATTCCTTGCTTTTGGGCAATTATGCTAAGTTCTTGAAAGAGGTGCGAGGCAATTATGCGAAAGCAGAAGAGTATTGTGGGAGAGCAATATTAGCAAACCCAAGTGATGGAAATGTGTTATCACTCTATGCTGATTTGATATGGTTAACTCAGAAAGACTCTTCAAGGGCTGAATCTTACTTTGATCAAGCTGTCAAAGCAGCTCCTGATGACTGCTATGTTCTAGCTTCATATGCGCGGTTTCTTTGGGATGCCGATGAAGAAGAGGAGGATGAGGAAGAGGAAGATGTGAAGGAGTCTTGCAGTCCGATCACGACGAATTTCTTCCATGGTGTCCCTCCTCCACCTCCTTTAGCTGCTGCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52666.p1 GENE.S_Transcript_52666~~S_Transcript_52666.p1 ORF type:complete len:285 (+),score=70.14,TPR_17|PF13431.2|0.00021,TPR_17|PF13431.2|0.96,TPR_17|PF13431.2|5.6,TPR_19|PF14559.2|0.00013,TPR_19|PF14559.2|1.6,TPR_12|PF13424.2|3.1e-06,TPR_1|PF00515.24|1.6e+02,TPR_1|PF00515.24|0.021,TPR_1|PF00515.24|6.4,TPR_16|PF13432.2|1.4e-05,TPR_2|PF07719.13|4.5e+02,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|2.2,TPR_11|PF13414.2|0.014,TPR_11|PF13414.2|0.21 S_Transcript_52666:414-1268(+)
MLLRSASTPLLNSWATSNIGSGSSSSSPETKSLISLATSSSVTYTPNNNPISRMCRASSESDLRHLSTVPTKRAPFGSGPGLMGRKGFGLVEVEEEEEGCECDVAAEERERERLGLGLLTGGGGGCGGGSGDGFGYGNWDSDSDPSSSTDLYYQKMIEANPGNSLLLGNYAKFLKEVRGNYAKAEEYCGRAILANPSDGNVLSLYADLIWLTQKDSSRAESYFDQAVKAAPDDCYVLASYARFLWDADEEEEDEEEEDVKESCSPITTNFFHGVPPPPPLAAAS*

Click here to download the sequence:
Link to NCBI Protein BLAST