Transcript Information: S_Transcript_52674.p1


Annotated TAIR IDAT1G78890.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29656623-29657537 | Forward length=155
E-Value8E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.859115432878
Replicate 227.414654351169
Replicate 328.120607493807
Condition 2: 8 Hour
Replicate 152.996762075251
Replicate 241.753400679094
Replicate 349.068659090675
Condition 3: 24 Hour
Replicate 130.928894447079
Replicate 230.293213493138
Replicate 327.968999736366


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52674.p1 GENE.S_Transcript_52674~~S_Transcript_52674.p1 ORF type:5prime_partial len:202 (+),score=32.78 S_Transcript_52674:1-606(+)
CCGATCTCCCTTTTCTTTTTTCTCTTTCCATTTCCGTTTCCCCCTTTATCCATCATCATCATCAATCATCATCCTCACCAAAACCCCCTCACTCTCTCTCTAATGGCGCGATACTTCACTCAAACCCTAATCAAGGTCCCCCACTCTCTCTCCTCCCCCTCAAAACTCTCTCTCTCCTCATCATCTCGATTATTTGCAAGTAAAGCCCAACTCATCGAACTCGATCTCGATTCTTCCTCTTCTACAGACTCTACACCCGGAGGAGGGGGAGAAGTGGAGGTGATGGGGTTGAAGAGACTTGAGGATGCAATCCACAGTATTATCGTGCGCCGATTAGCACCAGATTGGCTCCCCTTTCGACCAGGTTCCTCCTACTGGGTCCCCCCCAAACGTAAAGCCGACAATATCCTCGAAGTTGTCGGCAAATTGACCAACCCTTTGACCCCTGAAGAAGCTCTCTCTGTTTCCTCTGCTCGTGGCTGGCCCTCCTCTTCCTATTTCTGTCAAGAAGGTTCAGTCTCTGGACATCCTATTCCTGTGGAGGTAGAAGTGCAGGTCCATGTGCAGGACAGCACAGAGAAATCAATATCTGAGGACGAGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52674.p1 GENE.S_Transcript_52674~~S_Transcript_52674.p1 ORF type:5prime_partial len:202 (+),score=32.78 S_Transcript_52674:1-606(+)
PISLFFFLFPFPFPPLSIIIINHHPHQNPLTLSLMARYFTQTLIKVPHSLSSPSKLSLSSSSRLFASKAQLIELDLDSSSSTDSTPGGGGEVEVMGLKRLEDAIHSIIVRRLAPDWLPFRPGSSYWVPPKRKADNILEVVGKLTNPLTPEEALSVSSARGWPSSSYFCQEGSVSGHPIPVEVEVQVHVQDSTEKSISEDED*

Click here to download the sequence:
Link to NCBI Protein BLAST