Transcript Information: S_Transcript_52679.p1


Annotated TAIR IDAT2G19180.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits to 64 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8324742-8325575 | Forward length=179
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9209391599588
Replicate 22.9596425016178
Replicate 34.4982283130733
Condition 2: 8 Hour
Replicate 13.3808545624723
Replicate 21.0913096897428
Replicate 31.8196455272545
Condition 3: 24 Hour
Replicate 13.4632132363137
Replicate 23.8694312447422
Replicate 31.8455154442768


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52679.p1 GENE.S_Transcript_52679~~S_Transcript_52679.p1 ORF type:5prime_partial len:82 (+),score=12.79 S_Transcript_52679:3-248(+)
CGTAAAGCCGACAATATCCTCGAAGTTGTCGGCAAATTGACCAACCCTTTGACCCCTGAAGAAGCTCTCTCTGTTTCCTCTGCTCGTGGCTGGCCCTCCTCTTCCTATTTCTGTCAAGAAGATTTGCAGCGTATATATGGAACAAGATTGCAATATGGTCAACTACATGCACTACTTTGTTTGGAGTACTGGGACCAGCTCATAATTCGAACAAAGAAAACTGAACTGCGAATTAGGAGTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52679.p1 GENE.S_Transcript_52679~~S_Transcript_52679.p1 ORF type:5prime_partial len:82 (+),score=12.79 S_Transcript_52679:3-248(+)
RKADNILEVVGKLTNPLTPEEALSVSSARGWPSSSYFCQEDLQRIYGTRLQYGQLHALLCLEYWDQLIIRTKKTELRIRSN*

Click here to download the sequence:
Link to NCBI Protein BLAST