Transcript Information: S_Transcript_52686.p1


Annotated TAIR IDAT5G16810.1
Annotated Gene NameProtein kinase superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5526860-5529878 | Reverse length=418
E-Value9E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5345715462077
Replicate 22.5681553982292
Replicate 34.2935470247536
Condition 2: 8 Hour
Replicate 14.4004773670274
Replicate 26.8654350322971
Replicate 35.0752018107099
Condition 3: 24 Hour
Replicate 11.7337209119519
Replicate 24.3169164907328
Replicate 34.1369490823206


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52686.p1 GENE.S_Transcript_52686~~S_Transcript_52686.p1 ORF type:3prime_partial len:189 (+),score=30.03 S_Transcript_52686:207-770(+)
ATGGAGTTCTACCCACATCCATCGCATCGATCAATTGGAGTTCCATCTTCTTCTTCTTCTTCTTCTTCAATTATAAGAATTGGAGTAAAGCCTGGGCCCAGATTCAGAGTCAGAATTATGAGAATGCTATCAAAGTCAAAGCCTTGGACAATCTGTGCCAATCTCATTATGGATCCTGATTCTTTTCAAGTCGGTCGATTCCTCGGCAGTTACGGTTTTATGAACATCACCAGCTATTCAGGGCTTCAGGGTGGTGGTAACTTAGACATGGGCATGATGGGCAAATTGAGAACCCAGGATGTTGGTGAGGGCGCTGTCAACATCAGACTCTATGAAGGAAGGATAACTCAAGGTCCCCGGAGAGGCACTTCTGTTATCTTCAAGGTATACCCTGGGCAAAAAGCTGGTGGTGTCGAGGCTGATATGATGGCAGCCAATGAGCTCAGCACTCACGCTTACCTTCAGAGCAGCTCCAAAGAAATATGCCCAAATATCCTTCTACTCTTAGGAGGATTTGAGACCAAGACTGGTGAGCAGTGGCTCGCTTTCCGCAATGATGGGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52686.p1 GENE.S_Transcript_52686~~S_Transcript_52686.p1 ORF type:3prime_partial len:189 (+),score=30.03 S_Transcript_52686:207-770(+)
MEFYPHPSHRSIGVPSSSSSSSSIIRIGVKPGPRFRVRIMRMLSKSKPWTICANLIMDPDSFQVGRFLGSYGFMNITSYSGLQGGGNLDMGMMGKLRTQDVGEGAVNIRLYEGRITQGPRRGTSVIFKVYPGQKAGGVEADMMAANELSTHAYLQSSSKEICPNILLLLGGFETKTGEQWLAFRNDGR

Click here to download the sequence:
Link to NCBI Protein BLAST