Transcript Information: S_Transcript_52705.p1


Annotated TAIR IDAT3G02340.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:477032-478261 | Forward length=409
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4750382469524
Replicate 26.0081703705732
Replicate 36.5455246368136
Condition 2: 8 Hour
Replicate 18.7110411340075
Replicate 27.690322969906
Replicate 37.8982828179172
Condition 3: 24 Hour
Replicate 17.3628959979458
Replicate 27.5883297688663
Replicate 38.5574793517358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52705.p1 GENE.S_Transcript_52705~~S_Transcript_52705.p1 ORF type:complete len:448 (+),score=94.17,zf-RING_2|PF13639.2|1.7e-11,zf-RING_11|PF17123.1|4.7e-07,zf-rbx1|PF12678.3|1.2e+04,zf-rbx1|PF12678.3|7.2e-07,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4|PF00097.21|2.9e-06 S_Transcript_52705:339-1682(+)
ATGGCAGAGGAAAATGCATCAAATTCAACCTCTATCTCATTCTCATCTGTCATGTTCACTCCAGAAAACCCATCTCCTCTCTCACTCTCCCCACCCCACCCCACCTTCACTTCCTCCGACTCCGAACCCGAACCCGACTCCATTCATTTCGATTTGGATTTGGATTTGGATTTAGAAATGGAGCCCAAGGTCGAATCTTTCGACTCCGACGTGGATAGCGACGATGACGATGATCAGGTTAGGTTTATTACGAATTTATTCCACCGTTCTTCCGAAAATGACCTCAATTCCGATTCCCCTATACGTTTAGGGCTCGGAATTGGGGGCATTGATAGGTCCAGTGACGTTGATTTAGAATTAGGGTTAGGGTTTGGCTTTTGTTCTCACCGTAGTGTTGCCTCTTCTTCGTCCCAATCGATTAATGAACCTCGTCGTTTTGAGGGTCTCCGTGTCGTTAGTGTCGATTCTGACTCTGATTCTGCTGATGAAATTGATGCTGTTGGTTTTGGTGGGGTCTCTGATTTTGATCGCCCCCCTTTTTGCTGGGATTATCTTGGATTCAACAATCATAGAAGCAACAATAACAGTGATAATGCTCAAATCCATGAGAGAGAATTGGAATTGCCTAGCTTTGTGAGTGACGAGGATGGCAACGATGATGATGGAGGTTCAAGCGCTTTCTTCTTCGGTCAGTGTCATGATGGATACGACGACAATGAGGATAATGATGATGGAACCCTAATTGAGCTGGATACTGACGATAATGAAGGAGGAGATAGAGGGATTACGGATGTGACTAGTTTGTTTGATGCATACCAAGAGAGAGCGGAACAAGAGATTATGCTTCAGTCTGACACTGACGAGGGTGCGGATGTTGGTGTCGAGGATGCTATCCGAGACTTGGAGTGGGAAATCCTCTTGGCTGTTAACAATTTCAATCGAGAGGTTTATGAAATGGACTTCAATGTAGATATGTATGAGGCTATTCTTGGTGAGGTTGAGGACCGTATGAATGAATGGAGGGGAAGTCCTCCAGCTGCTGAGTCGGTTATTGAGAATCTTCCTACTGTTTGTTTATCGGAGGAGAATGATGTCGTTTGTGCTATCTGTAAGGATGATATTTCTGAGGAAATGGTGAGGCAGCTACCATGCTCGCATTATTACCATGGGGATTGTATCTTGCCGTGGTTGAAAATACGGAACACTTGTCCTGTTTGTCGCTATGAGCTGCCTACTGATGATCCTGAGTACGAGTGCAGGAAAAGGGAAAGGGAAGGGTTGAGTTCTGATGGTGATGTGTCTCTGAATTTACAGGTTGGATATGATTTCCATGTCTTCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52705.p1 GENE.S_Transcript_52705~~S_Transcript_52705.p1 ORF type:complete len:448 (+),score=94.17,zf-RING_2|PF13639.2|1.7e-11,zf-RING_11|PF17123.1|4.7e-07,zf-rbx1|PF12678.3|1.2e+04,zf-rbx1|PF12678.3|7.2e-07,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4|PF00097.21|2.9e-06 S_Transcript_52705:339-1682(+)
MAEENASNSTSISFSSVMFTPENPSPLSLSPPHPTFTSSDSEPEPDSIHFDLDLDLDLEMEPKVESFDSDVDSDDDDDQVRFITNLFHRSSENDLNSDSPIRLGLGIGGIDRSSDVDLELGLGFGFCSHRSVASSSSQSINEPRRFEGLRVVSVDSDSDSADEIDAVGFGGVSDFDRPPFCWDYLGFNNHRSNNNSDNAQIHERELELPSFVSDEDGNDDDGGSSAFFFGQCHDGYDDNEDNDDGTLIELDTDDNEGGDRGITDVTSLFDAYQERAEQEIMLQSDTDEGADVGVEDAIRDLEWEILLAVNNFNREVYEMDFNVDMYEAILGEVEDRMNEWRGSPPAAESVIENLPTVCLSEENDVVCAICKDDISEEMVRQLPCSHYYHGDCILPWLKIRNTCPVCRYELPTDDPEYECRKREREGLSSDGDVSLNLQVGYDFHVFL*

Click here to download the sequence:
Link to NCBI Protein BLAST