Transcript Information: S_Transcript_52714.p1


Annotated TAIR IDAT4G34100.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16330590-16334864 | Forward length=1108
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.143072822114
Replicate 247.600034163457
Replicate 349.083817293362
Condition 2: 8 Hour
Replicate 169.946533944822
Replicate 268.622660831917
Replicate 361.150187486206
Condition 3: 24 Hour
Replicate 154.182191334938
Replicate 247.48891402043
Replicate 349.451094936015


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52714.p1 GENE.S_Transcript_52714~~S_Transcript_52714.p1 ORF type:complete len:1143 (+),score=194.50,RINGv|PF12906.3|7.6e-16 S_Transcript_52714:235-3663(+)
ATGGAGATATCTCCGGCGAGGCAAGATCAGGACGACAACGACGACACCGTACAGATCGAGAGGTCCGACTCAGACGCCTCGTCGTCGACTTCATCATCTGCGTCGTCGTACACGTCATCGTCGGTTGTGCTCTTGAAGGAGAAGGATTCGAACGAGGTCCCGATCGAAGAAGAACAAGAAGAGCAGGATCAAGAAAATTCTTCGAATTCTAATAGTGGACCACCACCACCACCACCACCGGTGGTGTATATGAATAAGAATAATAATAATCAAGATGATGAGGAAGAAGAAGATGTGTGCAGGATATGTAGGAATCCAGGAGATGCAGATAATCCGTTACGTTATCCTTGTGCTTGTAGCGGTAGCATTAAATTCGTTCATCAGGATTGTCTCCTTCAGTGGTTGAATCATAGTAATGCTCGCCAGTGCGAGGTTTGCAAGCATGCGTTTTCATTCTCCCCTGTTTATGCACCTGATGCGCCAGCTAGACTTCCATTCCGGGAGTTTGTGTTTGGGATAGGGAAGAAAGCTTGTCATGTTCTGAAGTTCATTCTGCGTCTTAGTTTTGTGCTATCTGTTTGGCTTCTTATCATTCCCTTCATTACCTTCTGGTTTTGGCGGCTATCTTTTGTTCGTAGTTGGGGTGAAACCGTTCGTTTGTTTGTCAGTCATATGTCAACTACAGTTATCCTCACCGATTGTCTCCATGGGTTTCTCCTGTCTGCTAGCATCGTATTTATTTTTCTTGGGGCTACTTCTTTGAGAGATTATTTTAGGCATTTGCGAGAGCTTGGAGGGCAGGATGCTGAGAGAGAAGATGAAGGTGATCTTTTTCGAAATGGGGCCCGTCCCGTTAGACGGCCTCTTGGACAAGCTAATAGAAATTTGGCCGGTGACGGCAACATTGATGATGTGGGAGGAGGTCAGGGAATTGCCGGAGCTGGTCAATTGATCCGAAGGAATGCAGAGAATGTCGCTGCACAGTGGGAGAGACAAGCTGCTCGGCTTGAGGCTCATGTTGAACAGATGTTTGACGGACTGGATGATGCGGATGGTGCAGAAGACGTTCCTTTTGATGAGCTTGTTGGCATGCAGGGTCCTGTTTTCCATTTACTTGAGAATGCGTTTACGGTCCTGGCGAGCAACTTGATCTTTCTTGTAGTTGTTATCCTTGTTCCTTTCTCATTTGGTCGAATAATACTCCACTATGTATCTTGGTTTGTCTCCTCAGCCTCAAATCCTGCAGTTTCCACAGTCATACCGCTCACAGAGCCTGCTTTCTCCTTAGCCAACATTACCTTAAAGAATGCGTTGACTTCTGTCGCAAATCTTTCATCTGAGAACCAAGAGAATACACTGGTGGATAATGTAACTGAAATGTTGAAAGTAAATGCAAGTGAATTGGATGGATCTTACAACAACATCAGCACCCCCTTGTCGTCTGACATCTTGAAAGGGGTGGCTGCAGGAACATCCAGGCTTTCCGATGTTACCACCCTTGCTGTTGGATACATGTTTATTTTCTCTTTGGTCTTTCTTTACTTCGGCATTGTTTCATTGATTAGATACACTAAAGGTGAGCCTCTAACTATGGGGAGATTCCATGGTATTGCCTCCATAGCAGAGGCAGTTCCATCTCTTGTACGACAGTTCTTGGCAGCCATGAGACACTTAATGACCATGATTAAGGTCGCCTTTCTTCTAGTAATTGAACTTGGGGTATTTCCTTTAATGTGTGGCTGGTGGCTGGATGTCTGCACTATAAGGATGTTTGGGAAGACAATGGCTCAAAGAGTTGAATTCTTTTCAGTCTCTCCATTGGCAAGTTCTTTGGTTCATTGGGTTGTGGGAATTTTCTACATGCTACAAATTAGTATCTTTGTTAGCCTTCTGCGAGGGGTTCTGCGTAATGGTGTCCTCTATTTTCTCCGAGATCCAGCCGATCCAAACTACAATCCATTCCGTGATCTGATTGATGATCCAGTGCACAAACATGCTCGTCGAGTTTTGCTTTCTGTCGCTGTCTATGGAAGCTTGATTGTGATGCTAGTTTTTCTGCCTGTCAAACTTGCAATGAGGATGGCACCGTCCATATTTCCATTGGATATCTCAGTATCAGATCCATTTACTGAGATACCTGCAGACATACTCCTATTTCAAATCTGCATTCCCTTTGCAATTGAGCATTTCAAATTGAGAACGACTATCAAGTCTCTTCTTCACTATTGGTTCACTGCTGTGGGCTGGACTCTTGGCTTGACTGAGTTCTTACTTCCCAGACCTGAGGATGCAACTAGTCAGGATAATGTTAATGGTGATGCTGTTAGACAGGATAGATTACGTGGCCTACAGCTTGGTGGTGGTGCTCAGCAAGAACAGGCCCAGCTACCACTACTTGCTGATGCTCCAAATAATGAGGCCAATGGTTCTGAAAATCCTGATGTGACCGAAGAGTATGATGGAGAAGAACAATCTGATTCAGAGAGGTATGGATTTGTATTCCGTATTGTGCTACTATTGGTGGTGGCATGGATGACTCTTCTTGTCTTCAATTCGGCCTTAATAATTATACCTGTATCTCTTGGACGGGCAATCTTCAATGCGATTCCTGTTCTCCCTATAACACATGGCATTAAGTGCAATGATCTTTATGCTTTCACCATTGGAAGTTACCTTATTTGGACTGCCATAGCTGGAGTCAGATATACAATTGAGCAGATCAGATCCAGGAGGGCTGCAGTATTGTTTGGTCAAATTTGGAAGTGGTGTGGAATTGTTCTCAAGAGTTCTGCACTTCTGTCAATATGGATCTTCGTCATTCCAGTCTTGATTGGGCTGCTGTTTGAGCTGCTAGTGATTGTGCCGATGCGGGTGCCAATTGATGAGAACCCTGTTTTCCTTCTTTATCAGGACTGGGCTTTGGGACTCATCTTTTTGAAAATTTGGACTAGACTGGTTATGTTGGACCACATGATGCCACTGGTGGATGAGAGATGGAGAACAAAATTTGAGAGGGTGAGAGAAGATGGTTTCTCCAGGCTGCAGGGTCTTTGGGTGCTGAAGGAGATTGTTTTACCTATCATTATGAAGCTGCTTACAGCTCTGTGTGTACCATATGTTCTAGCTCGAGGAGTATTCCCTGTTTTCGGGTATCCCTTGGTCGTTAACTCGGCTGTTTATCGGTTTGCTTGGTTGGGATGCCTGTGTGTAAGTGTGTTGTTCTTCTGCGTGAAGAGGTTCCATGTCTGGTTCACCAACTTGCACAACTCCATCCGCGACGACCGTTACCTAATTGGTCGTCGACTCCATAATTTTGGGGAAGCCATAGCAGAAAGAGTTGTGGAAGGTATACAAACTTCGAGTTTGCAGCAAGATGTTGCATTTGGACAAGAAGTGGGATTGAGATTTAGGCGGAGGAACCCGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52714.p1 GENE.S_Transcript_52714~~S_Transcript_52714.p1 ORF type:complete len:1143 (+),score=194.50,RINGv|PF12906.3|7.6e-16 S_Transcript_52714:235-3663(+)
MEISPARQDQDDNDDTVQIERSDSDASSSTSSSASSYTSSSVVLLKEKDSNEVPIEEEQEEQDQENSSNSNSGPPPPPPPVVYMNKNNNNQDDEEEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAPDAPARLPFREFVFGIGKKACHVLKFILRLSFVLSVWLLIIPFITFWFWRLSFVRSWGETVRLFVSHMSTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQDAEREDEGDLFRNGARPVRRPLGQANRNLAGDGNIDDVGGGQGIAGAGQLIRRNAENVAAQWERQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLLENAFTVLASNLIFLVVVILVPFSFGRIILHYVSWFVSSASNPAVSTVIPLTEPAFSLANITLKNALTSVANLSSENQENTLVDNVTEMLKVNASELDGSYNNISTPLSSDILKGVAAGTSRLSDVTTLAVGYMFIFSLVFLYFGIVSLIRYTKGEPLTMGRFHGIASIAEAVPSLVRQFLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKTMAQRVEFFSVSPLASSLVHWVVGIFYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPADILLFQICIPFAIEHFKLRTTIKSLLHYWFTAVGWTLGLTEFLLPRPEDATSQDNVNGDAVRQDRLRGLQLGGGAQQEQAQLPLLADAPNNEANGSENPDVTEEYDGEEQSDSERYGFVFRIVLLLVVAWMTLLVFNSALIIIPVSLGRAIFNAIPVLPITHGIKCNDLYAFTIGSYLIWTAIAGVRYTIEQIRSRRAAVLFGQIWKWCGIVLKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPIDENPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDERWRTKFERVREDGFSRLQGLWVLKEIVLPIIMKLLTALCVPYVLARGVFPVFGYPLVVNSAVYRFAWLGCLCVSVLFFCVKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEAIAERVVEGIQTSSLQQDVAFGQEVGLRFRRRNPA*

Click here to download the sequence:
Link to NCBI Protein BLAST