Transcript Information: S_Transcript_5272.p1


Annotated TAIR IDAT1G21440.1
Annotated Gene NamePhosphoenolpyruvate carboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7502325-7504103 | Reverse length=336
E-Value1.2E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.032604942432
Replicate 28.5179124241038
Replicate 37.7622908199964
Condition 2: 8 Hour
Replicate 17.6258516007469
Replicate 26.9381049578899
Replicate 38.9715434539953
Condition 3: 24 Hour
Replicate 15.2538327382442
Replicate 27.8175805753856
Replicate 310.056891123559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5272.p1 GENE.S_Transcript_5272~~S_Transcript_5272.p1 ORF type:3prime_partial len:316 (+),score=58.33,PEP_mutase|PF13714.2|3.4e-47,ICL|PF00463.17|3.6e-16 S_Transcript_5272:106-945(+)
ATGGCAAGTGTGTTCATGGCAGTGACCAAAAGAGCGGCGACCGGCCAAGTGCCGGTGGCGGGGCTCCGATCAATGTCGACCCGGTCCGCCGGGCAGACCAAGATTCACAAGTTGATAGAGGAGCATGGGACTGTTCTTTTGCCTGGTGTTCATGATGCTTTTGCCTCCACTTGTGTGCAAAAAACCGGGTTCAAGGCCGGTTTTGTCTCCGGTTTTGGTGTCTCTGCCTCTCACTTGGGAAAACCTGACTTCGGCTTGCTCACGACAACGGAAATGACAGAAGTTGCAAGGAGAGTGTGTGCTGCCGCCCCGGAAGTAGCTTTCATTGTTGATGCTGACACTGGTGGAGGTGGTCCTCTCAATGTCCAAAGGGTAGTCAAGGAATTAATGGCTGCTGGTGCTTCTGGTTGCTTCCTAGAGGACCAACTGTGGCCCAAGAAGTGTGGTCATATGGCTGGCAAACAGGTTGTGCCTGCAGAGGAGCACGCAGTTAAAATAGCTGCAGCAAGAGACGCAATTGGTGATGCTGATTTTTTCCTTGTAGCCAGGACTGATGCCCGATCAGTCAATGGTCTCGACGATGCCATTGCTCGAGCCAACCTCTACTACGAGGCTGGTGCTGATGGTCTCTTTGTCGAGGCACCCCAAAACGATGAGGAGCTAAAAAGGATTGGCCGCGAAGTGAAAGGATTCAAGATCGCAAACATGATCGAGGGAGGAAAAACACCATTACACACACCAGCAGAGTTCAATGAAATTGGATTCAGTTTAGTTAAACATCCCCTTACATCAATCTTCACTACAGCGCGTGCCTTGCTTGAGATCCTTAATGTTCTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5272.p1 GENE.S_Transcript_5272~~S_Transcript_5272.p1 ORF type:3prime_partial len:316 (+),score=58.33,PEP_mutase|PF13714.2|3.4e-47,ICL|PF00463.17|3.6e-16 S_Transcript_5272:106-945(+)
MASVFMAVTKRAATGQVPVAGLRSMSTRSAGQTKIHKLIEEHGTVLLPGVHDAFASTCVQKTGFKAGFVSGFGVSASHLGKPDFGLLTTTEMTEVARRVCAAAPEVAFIVDADTGGGGPLNVQRVVKELMAAGASGCFLEDQLWPKKCGHMAGKQVVPAEEHAVKIAAARDAIGDADFFLVARTDARSVNGLDDAIARANLYYEAGADGLFVEAPQNDEELKRIGREVKGFKIANMIEGGKTPLHTPAEFNEIGFSLVKHPLTSIFTTARALLEILNVLK

Click here to download the sequence:
Link to NCBI Protein BLAST