Transcript Information: S_Transcript_527475.p1


Annotated TAIR IDAT2G26490.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11268035-11269432 | Forward length=465
E-Value2.7E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.044227184852759
Condition 2: 8 Hour
Replicate 10.10228004948265
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.10869933609759
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_527475.p1 GENE.S_Transcript_527475~~S_Transcript_527475.p1 ORF type:3prime_partial len:417 (-),score=21.18,WD40|PF00400.28|0.086,WD40|PF00400.28|0.74,WD40|PF00400.28|0.021,WD40|PF00400.28|7.7e-06,WD40|PF00400.28|0.072,WD40|PF00400.28|0.01,WD40|PF00400.28|1.1e+03,PQQ_3|PF13570.2|11,PQQ_3|PF13570.2|1.4,PQQ_3|PF13570.2|1.2e+04,PQQ_3|PF13570.2|0.14,PQQ_3|PF13570.2|68,PQQ_3|PF13570.2|2.4e+03,Nucleoporin_N|PF08801.7|2.6e+02,Nucleoporin_N|PF08801.7|0.27,Nucleoporin_N|PF08801.7|0.089,Nucleoporin_N|PF08801.7|36,Nucleoporin_N|PF08801.7|17,Nup160|PF11715.4|1.7e-05,Nup160|PF11715.4|2.6 S_Transcript_527475:1-1089(-)
ATGGCAGATGACACGGATTATTCGATCCGACAAAGCAGCTTCTCGGCAATGGGGAACTCTTTCATTGATGATCAGCCAAGAGCTAGCGCTGAAATGTCTCCTATGATGATGTCACCTTGGAATCAAGTCTCCCCTTTTGCAAAATCGCCTTGGTCGCAACAATCTGACGCCCTTGAAGAACCTTCTCAACAGAATGCCATGATTGGTTCACTTGTTCGTGAAGAGGGTCACATTTATTCCTTAGCTACAAAGGGTGACCTTCTGTACACCGGGTCGGATAGTAAGAACATTCGTGTTTGGAAGAACTTGAAGGAGTTTTCCGGGTTTAAATCAGCTTCGGGGCTAGTCAAGGCGATTGTGATAGCTGGGGGAAAGATATTTACGGGTCATCAAGACGGTAAGATTCGGGTCTGGAAAGTCTCTCCTAAGAACCCAAGCGTTCACAAACGGGCTGGATCGTTACCCACTTTGAAAGATATTTTCAAGGCATCCATAAAGCCGAGCAACTATGTTGAGGTGAAACGACACCGTAGCGCTTTATGGATAAAACACTCGGACGCGATATCTTGTTTGAGCATGTGTGAAGAACAAGGGCTGTTGTACTCAGCGTCATGGGATAGGACCTTCAAGGTGTGGCGGATCTCCGACTCCAAATGCCTGGAGTCGGTGGCCGCTCACGAGGACGCCGTCAACTCTGTGGTGGCGAGCTCGGAGGGGCTCGTCTTCACGGGTTCCGCTGACGGTACCGTCAAGGTGTGGAGGAGAGAGATGCAAGGGAAAGGGAGCAAGCACTTCTTTGTGCAAACCTTGCTCAAGCAAGAGTGCGCGGTGACCGCCCTAGCCGTGGACCCCACCGGCTCGATCGTGTACTGCGGGTCCAGTGATGGCATGGTGAACTTCTGGGAGAGGGAGAAGAACTTGGCCCACGGAGGGGTGCTCAGAGGCCATAAGTTGGCCGTACTTTGCCTCGCCGCACGTGCTCGGCTCGTGTTTAGCGGATCAGCTGATAAGAGTATCTGCGTTTGGCGGAGGGACGGGACAGTGCATACGTGCCTCTCGGTGTTGTCCGGACACGGTGGACCCGTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_527475.p1 GENE.S_Transcript_527475~~S_Transcript_527475.p1 ORF type:3prime_partial len:417 (-),score=21.18,WD40|PF00400.28|0.086,WD40|PF00400.28|0.74,WD40|PF00400.28|0.021,WD40|PF00400.28|7.7e-06,WD40|PF00400.28|0.072,WD40|PF00400.28|0.01,WD40|PF00400.28|1.1e+03,PQQ_3|PF13570.2|11,PQQ_3|PF13570.2|1.4,PQQ_3|PF13570.2|1.2e+04,PQQ_3|PF13570.2|0.14,PQQ_3|PF13570.2|68,PQQ_3|PF13570.2|2.4e+03,Nucleoporin_N|PF08801.7|2.6e+02,Nucleoporin_N|PF08801.7|0.27,Nucleoporin_N|PF08801.7|0.089,Nucleoporin_N|PF08801.7|36,Nucleoporin_N|PF08801.7|17,Nup160|PF11715.4|1.7e-05,Nup160|PF11715.4|2.6 S_Transcript_527475:1-1089(-)
MADDTDYSIRQSSFSAMGNSFIDDQPRASAEMSPMMMSPWNQVSPFAKSPWSQQSDALEEPSQQNAMIGSLVREEGHIYSLATKGDLLYTGSDSKNIRVWKNLKEFSGFKSASGLVKAIVIAGGKIFTGHQDGKIRVWKVSPKNPSVHKRAGSLPTLKDIFKASIKPSNYVEVKRHRSALWIKHSDAISCLSMCEEQGLLYSASWDRTFKVWRISDSKCLESVAAHEDAVNSVVASSEGLVFTGSADGTVKVWRREMQGKGSKHFFVQTLLKQECAVTALAVDPTGSIVYCGSSDGMVNFWEREKNLAHGGVLRGHKLAVLCLAARARLVFSGSADKSICVWRRDGTVHTCLSVLSGHGGPVK

Click here to download the sequence:
Link to NCBI Protein BLAST