Transcript Information: S_Transcript_52754.p1


Annotated TAIR IDAT1G17200.1
Annotated Gene NameUncharacterised protein family (UPF0497)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5878493-5879871 | Forward length=204
E-Value2.1E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1142.54183100599
Replicate 2145.6144110796
Replicate 3126.67010929614
Condition 2: 8 Hour
Replicate 1131.8013147893
Replicate 2116.00622001966
Replicate 3112.81802268978
Condition 3: 24 Hour
Replicate 1132.66770705263
Replicate 2153.22947729179
Replicate 3131.76980272136


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52754.p1 GENE.S_Transcript_52754~~S_Transcript_52754.p1 ORF type:complete len:205 (+),score=26.90,DUF588|PF04535.8|1.5e-37 S_Transcript_52754:102-716(+)
ATGGCACATCAACAAGAGAAAGGAGTGGTGATGGTGAAAAGAGATCAAAATGATCGAGAACTAGATGAAGTTGGAGAAGCTCCAAGCTGCATGCGTACGGCTGAGACTCTACTTAGGTTGTTGCCTTTGAGTCTTTGTGTAGCTGCCCTTGTTGTCATGCTCAAGAACTCTGAGACGAATGACTATGGCTCTCTTTCATACACTGATCTTGGAGCTTTCAAATATGTGGTTCATGCCAACGGAATATGCGCTGGTTATTCACTCCTTTCGGCTGTGATAACCGCTGTGGCTCGCCCGTCCACCATGTCACGAGCTTGGACCTTCTTCCTCCTCGACCAGCTATTCACGTACATAATTCTAGGGGCAGGAGTAGTGTCAACAGAGATTATGTACGTGGCATATAAAGGGAACCAAAACGTCACATGGAGTGCAGCCTGTGGTTCATACCATGGATTCTGTCACAAAGCTACAACATCCGTGGCCATAACCTTTGTTGTGGTGCTTTGCTATGCTGCACTTTCTCTCATCTCTTCCTACAAATTGTTCAGCCGCTTTGACCCACCAAGTATCCACCCTACCAACAAGGGTACTGAAATGGGTGTTTTCCATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52754.p1 GENE.S_Transcript_52754~~S_Transcript_52754.p1 ORF type:complete len:205 (+),score=26.90,DUF588|PF04535.8|1.5e-37 S_Transcript_52754:102-716(+)
MAHQQEKGVVMVKRDQNDRELDEVGEAPSCMRTAETLLRLLPLSLCVAALVVMLKNSETNDYGSLSYTDLGAFKYVVHANGICAGYSLLSAVITAVARPSTMSRAWTFFLLDQLFTYIILGAGVVSTEIMYVAYKGNQNVTWSAACGSYHGFCHKATTSVAITFVVVLCYAALSLISSYKLFSRFDPPSIHPTNKGTEMGVFHN*

Click here to download the sequence:
Link to NCBI Protein BLAST