Transcript Information: S_Transcript_52781.p1


Annotated TAIR IDAT4G03390.1
Annotated Gene NameSTRUBBELIG-receptor family 3
Annotated Gene Symbol(s)SRF3
Annotation TypeHomolog
Chromosome Positionchr4:1490912-1494553 | Reverse length=776
E-Value3E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.05272082423
Replicate 26.8974766525564
Replicate 38.4767855291083
Condition 2: 8 Hour
Replicate 19.625124408147
Replicate 28.3836534239969
Replicate 38.3851160350858
Condition 3: 24 Hour
Replicate 17.4625378384017
Replicate 27.4607578481144
Replicate 36.6841028651239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52781.p1 GENE.S_Transcript_52781~~S_Transcript_52781.p1 ORF type:3prime_partial len:483 (+),score=111.44,LRR_8|PF13855.2|34,LRR_8|PF13855.2|5.2e-09,LRR_8|PF13855.2|0.42,LRR_1|PF00560.29|48,LRR_1|PF00560.29|0.25,LRR_1|PF00560.29|3,LRR_1|PF00560.29|84,LRR_1|PF00560.29|27,LRR_4|PF12799.3|23,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|0.29 S_Transcript_52781:428-1873(+)
ATGGGGTGGAAGAGTTTTATCACTGTTTTAGTGTTCATCTTTCTGCAGCATATTGCTCATGGAGTGACTAATCCAGATGATGTTGCTGCAATTAACAGCTTGTACATTGCTTTTGGTTCTCCCGAACTCCCTGGATGGGTTGCTACCGGGGGAGATCCATGTGGTGAAGCTTGGCAAGGCGTCCAGTGCGACGCTACGTCGACGAACATAATCTCAATAAGTCTTGTTGGTGCTAATTTGGGAGGTGGACTAGGGGACAACCTAAGTTCATTTTCCTCTATCAAAAACATTGATTTGAGCAACAACCATATTGGTGGGAGTGTTCCATCAAGTTTACCGGCTTCCTTGCAGGCCTTTTTTCTTTCAGATAACAATATGACTGGAAGTATCCCGAGCACTATTTCCTCCCTCACCAATCTCACTACTTTGAAGCTAAATGACAATCATCTTACTGGAGAGTTGCCAGATGCCTTTCAATCTCTTTCAGCTTTGTCAAGCATAGATTTAGCAGGTAATAGTTTGAGTGGAGAACTGCCTCCTTCAATGGAGAATCTGTCTGCACTAAAAAGTCTGCACTTGCAGGACAATCAGCTGTCAGGGACCCTTGATGTTTTACAGAATCTTCCACTGCAAGACTTGAACATAGAAAACAACAATTTCTCTGGACCTATACCTGATAAGTTGCTGAACATTCCCACCTTCAAATCAGATGGGAATCCTTTTAATAACTCTGCTGCTCCATTGCCTGCACCACCAGCTCCCTCAATGCAGCCTTCGCCAGTTTCTCCTGCTCAATCACCACCCCGTTCAGGCACATCAATTCCAGGCTCATCAACTCCAGGCTCGTCAACTCCAGGCTCGTCAACTCCAGGCCGAGCAACTCCAGGACAGAAGCCTGACAAACAGGCAACCTCTCCATCTACACAGGATGAACCTCATACTGAAAAGAAAACACAGTCCTCAAAAACTAAGAGAATTGTTGGGATTTCAATTGCCTCAGTGGCGGGATTTATAATCCTGACTTTGGCACTACTGATGTGCGTGCCATGGTGTTTTAGCAGGAGTAGAGAGTACTACCGTGTAAGGAGACATGAAATTCAACCCTATATGGCAGCAAGAGAAAACCCTCTCAACAATGGACCACTTAGGCAACGACGCCACCAGATTGAAGAAGCCAAAAAAGATACCAATGTGGGGATGAAAGATGTGCCTCCAGCAGAAGTAAAGAGGAGTGTTGCAGTTTCAAAACCACAAAATGAACAAGACCTCTACTCGCAAAGATCAATGTTGCCGTTGAGGAAGCTTGACAGTGAATTAAGTCTTAGTGACATCGAACTAATGAGGCCTCCGCCGCCGCCGCCACCACCACCACCTCCACCTCCTTTTGCTGCTGACAAGGACATTGTGAAGCCCATCACATCTACAGAAGCCATAGCTGAGAAGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52781.p1 GENE.S_Transcript_52781~~S_Transcript_52781.p1 ORF type:3prime_partial len:483 (+),score=111.44,LRR_8|PF13855.2|34,LRR_8|PF13855.2|5.2e-09,LRR_8|PF13855.2|0.42,LRR_1|PF00560.29|48,LRR_1|PF00560.29|0.25,LRR_1|PF00560.29|3,LRR_1|PF00560.29|84,LRR_1|PF00560.29|27,LRR_4|PF12799.3|23,LRR_4|PF12799.3|3.3,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|0.0049,LRR_4|PF12799.3|0.038,LRR_4|PF12799.3|0.29 S_Transcript_52781:428-1873(+)
MGWKSFITVLVFIFLQHIAHGVTNPDDVAAINSLYIAFGSPELPGWVATGGDPCGEAWQGVQCDATSTNIISISLVGANLGGGLGDNLSSFSSIKNIDLSNNHIGGSVPSSLPASLQAFFLSDNNMTGSIPSTISSLTNLTTLKLNDNHLTGELPDAFQSLSALSSIDLAGNSLSGELPPSMENLSALKSLHLQDNQLSGTLDVLQNLPLQDLNIENNNFSGPIPDKLLNIPTFKSDGNPFNNSAAPLPAPPAPSMQPSPVSPAQSPPRSGTSIPGSSTPGSSTPGSSTPGRATPGQKPDKQATSPSTQDEPHTEKKTQSSKTKRIVGISIASVAGFIILTLALLMCVPWCFSRSREYYRVRRHEIQPYMAARENPLNNGPLRQRRHQIEEAKKDTNVGMKDVPPAEVKRSVAVSKPQNEQDLYSQRSMLPLRKLDSELSLSDIELMRPPPPPPPPPPPPPFAADKDIVKPITSTEAIAEKP

Click here to download the sequence:
Link to NCBI Protein BLAST