Transcript Information: S_Transcript_52801.p1


Annotated TAIR IDAT5G09680.1
Annotated Gene Namereduced lateral root formation
Annotated Gene Symbol(s)RLF
Annotation TypeOrtholog
Chromosome Positionchr5:2999362-3000185 | Reverse length=211
E-Value1.1E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.963973075744
Replicate 232.587441819934
Replicate 331.932652582913
Condition 2: 8 Hour
Replicate 132.402536524266
Replicate 228.458888728981
Replicate 327.040244841655
Condition 3: 24 Hour
Replicate 138.28643890931
Replicate 230.672225560922
Replicate 327.806635527902


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52801.p1 GENE.S_Transcript_52801~~S_Transcript_52801.p1 ORF type:5prime_partial len:283 (+),score=44.91,Cyt-b5|PF00173.24|1e-19 S_Transcript_52801:1-849(+)
TTTCATTTTTCTGAAGCCAATTTTCATGTAACCAAACATCTGCATCTGGTCTGGCGGCTGTATTACGCTGATTTGCTGAATTTTGATTTTCTTCCGAAGAGAGAAACACCAACACTGAATTTACATCGGGAGTTAAATTTCTGCATTTGTTTGGTGATTGCTTGTCAGATGGAAAACAACAAAGATGATGATTTCACCTTCTGCCAGGTCAGTAAACCCATTGATGAAAATGGTTTTGATGAACAAAAGGTAGTTCCGGGCATAAGGAACATCGCTTTAAAGGATGAAGCTGCAAGTAGCAATAGCAGAGATAACATTAGTCTGTGGAACGATATGCTTCCTATTAATACTACCTCAGTGAAGGAGGAAAAGGTTGGGTCCTTGTCTGTCAATGTTATCAGTACTATTCCTCAAAAGCAGTCTAGCGAAGCACCAAGACAAGCAGCCCAAAATGGTGCTGCACGTGAACAGAAGCCTGTGAGCAGAAAATCTGCTCCTCGGGCGAAGGTTCCTTTTGAGAAGGGTTACAGCCAAATGGATTGGCTCAAGCTTACTCGCACGCATCCTGACCTTGCAGGACTAAAAGGTCAGTCAAACAGTAGGCTTATATCTTTGAGTGAAGTTAAACAACACCAAACAGAAGGTGCTATGTGGACTGTTTTAAAAGGACGTGTATATAATATATATCCTTATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAAGCTGTCGGAAAAGATTGCACAACCATATTTAACAAATACCACGCTTGGGTCAATGCAGAATTCTTACTGGAGAAGTGCTTGGTTGGTATCTTAGATAGCAGCAGCGACAGGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52801.p1 GENE.S_Transcript_52801~~S_Transcript_52801.p1 ORF type:5prime_partial len:283 (+),score=44.91,Cyt-b5|PF00173.24|1e-19 S_Transcript_52801:1-849(+)
FHFSEANFHVTKHLHLVWRLYYADLLNFDFLPKRETPTLNLHRELNFCICLVIACQMENNKDDDFTFCQVSKPIDENGFDEQKVVPGIRNIALKDEAASSNSRDNISLWNDMLPINTTSVKEEKVGSLSVNVISTIPQKQSSEAPRQAAQNGAAREQKPVSRKSAPRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNSRLISLSEVKQHQTEGAMWTVLKGRVYNIYPYMKFHPGGVDMLMKAVGKDCTTIFNKYHAWVNAEFLLEKCLVGILDSSSDRK*

Click here to download the sequence:
Link to NCBI Protein BLAST