Transcript Information: S_Transcript_52802.p1


Annotated TAIR IDAT5G09680.1
Annotated Gene Namereduced lateral root formation
Annotated Gene Symbol(s)RLF
Annotation TypeHomolog
Chromosome Positionchr5:2999362-3000185 | Reverse length=211
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5842425905967
Replicate 22.8971339822999
Replicate 34.7814500957483
Condition 2: 8 Hour
Replicate 14.5235676430282
Replicate 22.5610870496657
Replicate 33.4449854715121
Condition 3: 24 Hour
Replicate 12.6478646655266
Replicate 22.4418921563741
Replicate 34.4159808386062


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52802.p1 GENE.S_Transcript_52802~~S_Transcript_52802.p1 ORF type:5prime_partial len:297 (+),score=40.46,Cyt-b5|PF00173.24|5e-09 S_Transcript_52802:1-891(+)
TTTCATTTTTCTGAAGCCAATTTTCATGTAACCAAACATCTGCATCTGGTCTGGCGGCTGTATTACGCTGATTTGCTGAATTTTGATTTTCTTCCGAAGAGAGAAACACCAACACTGAATTTACATCGGGAGTTAAATTTCTGCATTTGTTTGGTGATTGCTTGTCAGATGGAAAACAACAAAGATGATGATTTCACCTTCTGCCAGGTCAGTAAACCCATTGATGAAAATGGTTTTGATGAACAAAAGGTAGTTCCGGGCATAAGGAACATCGCTTTAAAGGATGAAGCTGCAAGTAGCAATAGCAGAGATAACATTAGTCTGTGGAACGATATGCTTCCTATTAATACTACCTCAGTGAAGGAGGAAAAGGTTGGGTCCTTGTCTGTCAATGTTATCAGTACTATTCCTCAAAAGCAGTCTAGCGAAGCACCAAGACAAGCAGCCCAAAATGGTGCTGCACGTGAACAGAAGCCTGTGAGCAGAAAATCTGCTCCTCGGGCGAAGGTTCCTTTTGAGAAGGGTTACAGCCAAATGGATTGGCTCAAGCTTACTCGCACGCATCCTGACCTTGCAGGACTAAAAGGTCAGTCAAACAGTAGGCTTATATCTTTGAGTGAAGTTAAACAACACCAAACAGAAGGTGCTATGTGGACTGTTTTAAAAGGACGTGTATATAATATATATCCTTATATGAAGTTTCACCCTGGAGGTATGGACACCATCTTTATGTTTACTTTTATTCTTTATAAGCTTGATTATGATGTTTGCCTTCTGGTCAGCAGCATTCCGAAGTGTATTCTCTATGCTGACTGCAGCCGTATTAGGCAGTCAAGACCCTGTAATCCTTGGATGTTGTGTCTGAATTTGGTTTTGCCTTGCTCTCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52802.p1 GENE.S_Transcript_52802~~S_Transcript_52802.p1 ORF type:5prime_partial len:297 (+),score=40.46,Cyt-b5|PF00173.24|5e-09 S_Transcript_52802:1-891(+)
FHFSEANFHVTKHLHLVWRLYYADLLNFDFLPKRETPTLNLHRELNFCICLVIACQMENNKDDDFTFCQVSKPIDENGFDEQKVVPGIRNIALKDEAASSNSRDNISLWNDMLPINTTSVKEEKVGSLSVNVISTIPQKQSSEAPRQAAQNGAAREQKPVSRKSAPRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNSRLISLSEVKQHQTEGAMWTVLKGRVYNIYPYMKFHPGGMDTIFMFTFILYKLDYDVCLLVSSIPKCILYADCSRIRQSRPCNPWMLCLNLVLPCSL*

Click here to download the sequence:
Link to NCBI Protein BLAST