Transcript Information: S_Transcript_52818.p1


Annotated TAIR IDAT3G29270.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:11235326-11236117 | Forward length=263
E-Value1.5E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.184438384822
Replicate 226.928347710883
Replicate 327.979664248504
Condition 2: 8 Hour
Replicate 133.244905057127
Replicate 232.919792485073
Replicate 333.473175136339
Condition 3: 24 Hour
Replicate 131.396828743135
Replicate 228.782178960076
Replicate 327.619577143245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52818.p1 GENE.S_Transcript_52818~~S_Transcript_52818.p1 ORF type:complete len:263 (+),score=28.23,zf-RING_UBOX|PF13445.2|3.7e-08,zf-RING_2|PF13639.2|1.1e-05 S_Transcript_52818:200-988(+)
ATGTGGACGTGTGCTTCAAGAACTATTGCAGGCTGTGTCAAGTTGAAGAATGACATTCTTAATCCAAATCTAGAGTGCTCAGATGATGATGCATCTTATGATACCAACAGAGAGGAAGGACTGGAGTGCCCCATATGTTGGGAATCCTTCAATCTTGTTGAGAATGTTCCCTATGTGCTATGGTGTGGTCACACTCTCTGCAAGCATTGCGTCCTGGGACTGCCATGGGCTGCTCTGAAATTCCCCACTTTACCCGTCCAGCTGCCATTTTTTATCTCGTGCCCATGGTGCAATTTACTGTCACCTAGGATGAATTACAAGGGTGTTCTCAGATTCCCTAGGAAAAACTACTTTATCCTCTGGATGGTGGAGAGCATGAATGGTGAGAGATCAAGGTCTGACACATTTCATGGGGATCTTCGTCCGGGTGTTCCTTTGAACACAAATGCAGGAATGACAAGCCATTCCCATGTTAGAAACTGCCGGGAAATAACACGTGCACCGGAAAGGTTGGAACCTAACCATAACCCGGCTGTTGTACATCGTTACTTCAATAGAGAGAGATTCAGTGTGTCACTTCGCAAGTCCTTGGCTTTTGTTGTTCACCTAACAGCCAAATTTCCCCTGGTTGTGATATTCCTTCTTGTCACCCTGTATGCCATACCAGCAAGTGCTGCCATATTGGCCTTGTATATTCTCATCACTGTTCTATTTGCCTTCCCATCTTTTCTTGTGTTATATTTTGCATACCCCAGTTTGGATTGGCTGATCAGAGAAATTGTGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52818.p1 GENE.S_Transcript_52818~~S_Transcript_52818.p1 ORF type:complete len:263 (+),score=28.23,zf-RING_UBOX|PF13445.2|3.7e-08,zf-RING_2|PF13639.2|1.1e-05 S_Transcript_52818:200-988(+)
MWTCASRTIAGCVKLKNDILNPNLECSDDDASYDTNREEGLECPICWESFNLVENVPYVLWCGHTLCKHCVLGLPWAALKFPTLPVQLPFFISCPWCNLLSPRMNYKGVLRFPRKNYFILWMVESMNGERSRSDTFHGDLRPGVPLNTNAGMTSHSHVRNCREITRAPERLEPNHNPAVVHRYFNRERFSVSLRKSLAFVVHLTAKFPLVVIFLLVTLYAIPASAAILALYILITVLFAFPSFLVLYFAYPSLDWLIREIVT*

Click here to download the sequence:
Link to NCBI Protein BLAST