Transcript Information: S_Transcript_52826.p1


Annotated TAIR IDAT4G28600.1
Annotated Gene Nameno pollen germination related 2
Annotated Gene Symbol(s)NPGR2
Annotation TypeOrtholog
Chromosome Positionchr4:14130046-14132599 | Forward length=739
E-Value3.4E-258
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6829846387625
Replicate 26.118976791342
Replicate 35.2830754406148
Condition 2: 8 Hour
Replicate 15.4424173205183
Replicate 26.9038126661656
Replicate 36.9665074854822
Condition 3: 24 Hour
Replicate 14.4941296764504
Replicate 25.1642799815896
Replicate 33.8424208273419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52826.p1 GENE.S_Transcript_52826~~S_Transcript_52826.p1 ORF type:complete len:768 (+),score=162.82,TPR_12|PF13424.2|3.3e+02,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|1.5e+03,TPR_12|PF13424.2|12,TPR_12|PF13424.2|44,TPR_12|PF13424.2|1.5e-05,TPR_12|PF13424.2|1,TPR_12|PF13424.2|0.31,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|58,TPR_8|PF13181.2|14,TPR_8|PF13181.2|49,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|8.9e+02,TPR_8|PF13181.2|2.6e+02,TPR_8|PF13181.2|0.88,TPR_8|PF13181.2|7.9e+02,TPR_8|PF13181.2|4e+02,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|1e+02,TPR_8|PF13181.2|3.3e+03,TPR_2|PF07719.13|80,TPR_2|PF07719.13|5.9,TPR_2|PF07719.13|4.4e+02,TPR_2|PF07719.13|30,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|3.6e+02,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|25,TPR_2|PF07719.13|8.9e+02,TPR_2|PF07719.13|1.5e+02,TPR_19|PF14559.2|8.2,TPR_19|PF14559.2|94,TPR_19|PF14559.2|6.6e+03,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|7.6e-07,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|26,TPR_19|PF14559.2|1.5e+02,TPR_11|PF13414.2|1.4e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|7.4e+02,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.31,TPR_11|PF13414.2|0.0022,TPR_11|PF13414.2|0.00041,TPR_11|PF13414.2|0.056,TPR_11|PF13414.2|5.4e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|0.013,TPR_14|PF13428.2|8.2e+02,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|7.1e+03,TPR_14|PF13428.2|3.4e+02,TPR_1|PF00515.24|4e+03,TPR_1|PF00515.24|13,TPR_1|PF00515.24|1.8e+02,TPR_1|PF00515.24|1.7e+02,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.93,TPR_1|PF00515.24|9.7e+02,TPR_1|PF00515.24|0.56,TPR_1|PF00515.24|4.3,TPR_1|PF00515.24|7.9e+03,TPR_1|PF00515.24|7e+02,TPR_16|PF13432.2|5.3,TPR_16|PF13432.2|47,TPR_16|PF13432.2|1.1e+04,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|0.00012,TPR_16|PF13432.2|9.3e+03,TPR_16|PF13432.2|1.6e+02,TPR_16|PF13432.2|1.4e+04,TPR_17|PF13431.2|1.4e+03,TPR_17|PF13431.2|8.7e+02,TPR_17|PF13431.2|10,TPR_17|PF13431.2|1.7e+03,TPR_17|PF13431.2|4.4e+02,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|0.1,TPR_17|PF13431.2|2.6e+03 S_Transcript_52826:1166-3469(+)
ATGGTGTATATCATCCTAGGACAGTTTTATAAGTCCCTATCAAATAGATCTTCTGACATCTTGTGTTTTCTGCATCGGGGTATGAAAGAAGTACTTTTCAGTGTTATGACAGCTAAACACCAAACAAGAAGGCGGGTATCAGGTTTTAGACTCAGGTTGAAGAAGATGATGAAGTGCATTTTTTTAGGCAAACAAGTGAGAGTAGATGAAGCAGTTGAATCATCAGAGTCATCCTTGGCAACCCGGGATTATTCAACCAGTGGCCATATGGCTCGAGTGGATGAAGTTGATAGAAAGACTAATAGTAATACCATTGAGGAAGCTGAATCAACTCTTCGTGAAAGTGGTTACCTAAACTATGAGGAAGCTAGAGCACTGTTGGGAAGGCTGGAGTACCAGAAAGGAAACGTGGAAGCAGCTTTTCGCGTTTTTGAAGGCATAGACATTGAGGCTATAACACCAAATATTAAAGTTTCACTCGCCAGAAGAGGTGAGCCTCAAAGACGTCATTCTCAGAGTGATGTTGTGCCTCCAATGTCAATGCATGCTATTAGTCTTCTCTTCGAAGCAATTTTTCTTAAAGCCAAGTCATTGCAGACTCTTGGAAGGTTTGAAGAAGCTGCTCAATCATGCCAGGTGATTCTGGATACAGTTGAATCTGCATTACCAGAGGGTTTGAATGAAAGGATGGCCTCCAACTGCAAATTGCAGGAGATTTTGAACAACGCAGTTGAGTTGCTACCTGAGTTGTGGAAACTTGCTGGGTCTTCCAATGAAGCTATTTCATCATATCGGCGTGCATTACTCTATAGTTGGAATCTTGAACTGCAAACGCAAACGAGGATCGAGAAAGAGTTTGCAATTTTCCTTCTATACAGTGGCATTGAAGCAAGTCCCCTAACTCTCCGTTTCCAAGCAGAAGGAGCATACATTCCTAAAAACAATATAGAGGAGGCAATTCTTCTGTTGTTGCTCTTGCTTAGGAAATTTCTGCAAAGAAGAATAGACTGGGATCCATCAATCATGGATCATCTTTCCTTTGCACTATCTGTTTCAGGAGATTTAGGGACCCTGGCCTGTCAATTAGAAGCATTGCCTGCGGAGACAATGAATACCAAAGAGAAATATAGGACCCTGGCTCTGTGTTATCATGGAGAAGGTGAACATCAAATTGCCTTGAATCTGTTGAGGAACCTTCTCAGTGAGCGAGAAAACCAGAACTGTACACAAGAGTTGTTACTTGCTTCAAAACTCTGTACTGAAGACGCAAGGTCATCTGAAGAAGGTATCACTTACGCTCATAAGGCGATTGAGAGACTGGAAGGGCAATGTGAACAGCTGGCAGGTAGTGCCAACTGCTTCCTGGGCATTGTATCATCAATGCATTCCAGATTTAGTGCTTCTGACTCCAATAGGGTACTACTGCAATCTGAAGCCCTAAATGCAATGGGGACTGCTGAAGAACTCACAAAAGGAACAGACCCGAATGTAATATACCATATTTCCTTGGAAAATGCTGAGCAGAGGAAGTTGGATACTGCACTCTCTTATGCAAAGAAGCTGCTGAAACTTGAGGCTGGATCGGGTGCCAGAGCATGGATTCTTATAGCTCGAATATTGTCTGCTCAGAAGCGCTACGATGATGCAGAAACTATAGTCAATGCCGCGCTAGAGCAGACTGGTAAGTGGGAGCATGCTGAATTGTTGAGGACCAAGGCTAAACTCCAAATTGCTCAGGGACTGACGAAGAATGCTATACAGACATACACCCAACTTCTTGCAGTTCTCCAAGTTCGGAAGAAGAGCTTTGGTGTTGGGAAGAAGCTTCTAGAGAGAAGGGACCAAGATAGAATCTTGGAGATGGAGACATGGCATGACCTTGCCAATGTGTACATATGCCTGTCACAATGGCGAGATGCTGAGGTCTGCCTTTCAAAGTCAGAAAGTTTATGTCCTGATTCCGCTTCTAGATGTCATTCCAGAGGTTTACTCTATCAGGCAAAGGGTCTTGACATAGAAGCTCAGCACTCTTTCTGGGAAGCGCTGGACAAGGACCCGAACCATGTCCCGAGCTTGATTTCCATGGCTAAAATTCTCATGCATCTGGGAGATCAATCCTTGCCTGTTGCAAGAAGTTTTGTCAGACAAGCTATTCGTCTCGACAGGACTAATGACGTTGCTTGGTACACTCCTGGGCTTCTTCACAAATCAGAAGCTACTGGCGCATCAATTTTGGAAGCTGCTGAATGTTTCCAGGCTGCAGTTCTTCTCGAAGAGACTGCCCCTGTTGAGCCCTTCAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52826.p1 GENE.S_Transcript_52826~~S_Transcript_52826.p1 ORF type:complete len:768 (+),score=162.82,TPR_12|PF13424.2|3.3e+02,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|1.5e+03,TPR_12|PF13424.2|12,TPR_12|PF13424.2|44,TPR_12|PF13424.2|1.5e-05,TPR_12|PF13424.2|1,TPR_12|PF13424.2|0.31,TPR_8|PF13181.2|2.8e+03,TPR_8|PF13181.2|58,TPR_8|PF13181.2|14,TPR_8|PF13181.2|49,TPR_8|PF13181.2|2.2e+03,TPR_8|PF13181.2|8.9e+02,TPR_8|PF13181.2|2.6e+02,TPR_8|PF13181.2|0.88,TPR_8|PF13181.2|7.9e+02,TPR_8|PF13181.2|4e+02,TPR_8|PF13181.2|0.14,TPR_8|PF13181.2|1e+02,TPR_8|PF13181.2|3.3e+03,TPR_2|PF07719.13|80,TPR_2|PF07719.13|5.9,TPR_2|PF07719.13|4.4e+02,TPR_2|PF07719.13|30,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|0.15,TPR_2|PF07719.13|3.6e+02,TPR_2|PF07719.13|0.35,TPR_2|PF07719.13|25,TPR_2|PF07719.13|8.9e+02,TPR_2|PF07719.13|1.5e+02,TPR_19|PF14559.2|8.2,TPR_19|PF14559.2|94,TPR_19|PF14559.2|6.6e+03,TPR_19|PF14559.2|1.3e+03,TPR_19|PF14559.2|7.6e-07,TPR_19|PF14559.2|1.4e+02,TPR_19|PF14559.2|26,TPR_19|PF14559.2|1.5e+02,TPR_11|PF13414.2|1.4e+03,TPR_11|PF13414.2|47,TPR_11|PF13414.2|7.4e+02,TPR_11|PF13414.2|11,TPR_11|PF13414.2|0.31,TPR_11|PF13414.2|0.0022,TPR_11|PF13414.2|0.00041,TPR_11|PF13414.2|0.056,TPR_11|PF13414.2|5.4e+03,TPR_14|PF13428.2|11,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|4e+02,TPR_14|PF13428.2|1.1e+02,TPR_14|PF13428.2|0.013,TPR_14|PF13428.2|8.2e+02,TPR_14|PF13428.2|0.35,TPR_14|PF13428.2|7.1e+03,TPR_14|PF13428.2|3.4e+02,TPR_1|PF00515.24|4e+03,TPR_1|PF00515.24|13,TPR_1|PF00515.24|1.8e+02,TPR_1|PF00515.24|1.7e+02,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.93,TPR_1|PF00515.24|9.7e+02,TPR_1|PF00515.24|0.56,TPR_1|PF00515.24|4.3,TPR_1|PF00515.24|7.9e+03,TPR_1|PF00515.24|7e+02,TPR_16|PF13432.2|5.3,TPR_16|PF13432.2|47,TPR_16|PF13432.2|1.1e+04,TPR_16|PF13432.2|1.8e+03,TPR_16|PF13432.2|0.00012,TPR_16|PF13432.2|9.3e+03,TPR_16|PF13432.2|1.6e+02,TPR_16|PF13432.2|1.4e+04,TPR_17|PF13431.2|1.4e+03,TPR_17|PF13431.2|8.7e+02,TPR_17|PF13431.2|10,TPR_17|PF13431.2|1.7e+03,TPR_17|PF13431.2|4.4e+02,TPR_17|PF13431.2|1.2e+04,TPR_17|PF13431.2|0.1,TPR_17|PF13431.2|2.6e+03 S_Transcript_52826:1166-3469(+)
MVYIILGQFYKSLSNRSSDILCFLHRGMKEVLFSVMTAKHQTRRRVSGFRLRLKKMMKCIFLGKQVRVDEAVESSESSLATRDYSTSGHMARVDEVDRKTNSNTIEEAESTLRESGYLNYEEARALLGRLEYQKGNVEAAFRVFEGIDIEAITPNIKVSLARRGEPQRRHSQSDVVPPMSMHAISLLFEAIFLKAKSLQTLGRFEEAAQSCQVILDTVESALPEGLNERMASNCKLQEILNNAVELLPELWKLAGSSNEAISSYRRALLYSWNLELQTQTRIEKEFAIFLLYSGIEASPLTLRFQAEGAYIPKNNIEEAILLLLLLLRKFLQRRIDWDPSIMDHLSFALSVSGDLGTLACQLEALPAETMNTKEKYRTLALCYHGEGEHQIALNLLRNLLSERENQNCTQELLLASKLCTEDARSSEEGITYAHKAIERLEGQCEQLAGSANCFLGIVSSMHSRFSASDSNRVLLQSEALNAMGTAEELTKGTDPNVIYHISLENAEQRKLDTALSYAKKLLKLEAGSGARAWILIARILSAQKRYDDAETIVNAALEQTGKWEHAELLRTKAKLQIAQGLTKNAIQTYTQLLAVLQVRKKSFGVGKKLLERRDQDRILEMETWHDLANVYICLSQWRDAEVCLSKSESLCPDSASRCHSRGLLYQAKGLDIEAQHSFWEALDKDPNHVPSLISMAKILMHLGDQSLPVARSFVRQAIRLDRTNDVAWYTPGLLHKSEATGASILEAAECFQAAVLLEETAPVEPFR*

Click here to download the sequence:
Link to NCBI Protein BLAST