Transcript Information: S_Transcript_52827.p1


Annotated TAIR IDAT4G28600.1
Annotated Gene Nameno pollen germination related 2
Annotated Gene Symbol(s)NPGR2
Annotation TypeHomolog
Chromosome Positionchr4:14130046-14132599 | Forward length=739
E-Value8E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12226493676193
Replicate 20.20272088414256
Replicate 30.36716013642696
Condition 2: 8 Hour
Replicate 10.81643913924705
Replicate 20.30834094602992
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.971802027776
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52827.p1 GENE.S_Transcript_52827~~S_Transcript_52827.p1 ORF type:complete len:653 (+),score=124.42,TPR_19|PF14559.2|6.7,TPR_19|PF14559.2|78,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|9.9e+02,TPR_19|PF14559.2|5.6e-07,TPR_19|PF14559.2|1.3e+02,TPR_16|PF13432.2|4.3,TPR_16|PF13432.2|39,TPR_16|PF13432.2|8.6e+03,TPR_16|PF13432.2|1.5e+03,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|7.7e+03,TPR_2|PF07719.13|66,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|3.5e+02,TPR_2|PF07719.13|25,TPR_2|PF07719.13|86,TPR_2|PF07719.13|0.13,TPR_2|PF07719.13|2.9e+02,TPR_12|PF13424.2|2.8e+02,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|10,TPR_12|PF13424.2|36,TPR_12|PF13424.2|1.2e-05,TPR_14|PF13428.2|8.8,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|5.1e+03,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|0.01,TPR_14|PF13428.2|7.2e+02,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|1.6e+04,TPR_8|PF13181.2|48,TPR_8|PF13181.2|11,TPR_8|PF13181.2|40,TPR_8|PF13181.2|1.7e+03,TPR_8|PF13181.2|7.4e+02,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|0.73,TPR_8|PF13181.2|6.5e+02 S_Transcript_52827:1166-3124(+)
ATGGTGTATATCATCCTAGGACAGTTTTATAAGTCCCTATCAAATAGATCTTCTGACATCTTGTGTTTTCTGCATCGGGGTATGAAAGAAGTACTTTTCAGTGTTATGACAGCTAAACACCAAACAAGAAGGCGGGTATCAGGTTTTAGACTCAGGTTGAAGAAGATGATGAAGTGCATTTTTTTAGGCAAACAAGTGAGAGTAGATGAAGCAGTTGAATCATCAGAGTCATCCTTGGCAACCCGGGATTATTCAACCAGTGGCCATATGGCTCGAGTGGATGAAGTTGATAGAAAGACTAATAGTAATACCATTGAGGAAGCTGAATCAACTCTTCGTGAAAGTGGTTACCTAAACTATGAGGAAGCTAGAGCACTGTTGGGAAGGCTGGAGTACCAGAAAGGAAACGTGGAAGCAGCTTTTCGCGTTTTTGAAGGCATAGACATTGAGGCTATAACACCAAATATTAAAGTTTCACTCGCCAGAAGAGGTGAGCCTCAAAGACGTCATTCTCAGAGTGATGTTGTGCCTCCAATGTCAATGCATGCTATTAGTCTTCTCTTCGAAGCAATTTTTCTTAAAGCCAAGTCATTGCAGACTCTTGGAAGGTTTGAAGAAGCTGCTCAATCATGCCAGGTGATTCTGGATACAGTTGAATCTGCATTACCAGAGGGTTTGAATGAAAGGATGGCCTCCAACTGCAAATTGCAGGAGATTTTGAACAACGCAGTTGAGTTGCTACCTGAGTTGTGGAAACTTGCTGGGTCTTCCAATGAAGCTATTTCATCATATCGGCGTGCATTACTCTATAGTTGGAATCTTGAACTGCAAACGCAAACGAGGATCGAGAAAGAGTTTGCAATTTTCCTTCTATACAGTGGCATTGAAGCAAGTCCCCTAACTCTCCGTTTCCAAGCAGAAGGAGCATACATTCCTAAAAACAATATAGAGGAGGCAATTCTTCTGTTGTTGCTCTTGCTTAGGAAATTTCTGCAAAGAAGAATAGACTGGGATCCATCAATCATGGATCATCTTTCCTTTGCACTATCTGTTTCAGGAGATTTAGGGACCCTGGCCTGTCAATTAGAAGCATTGCCTGCGGAGACAATGAATACCAAAGAGAAATATAGGACCCTGGCTCTGTGTTATCATGGAGAAGGTGAACATCAAATTGCCTTGAATCTGTTGAGGAACCTTCTCAGTGAGCGAGAAAACCAGAACTGTACACAAGAGTTGTTACTTGCTTCAAAACTCTGTACTGAAGACGCAAGGTCATCTGAAGAAGGTATCACTTACGCTCATAAGGCGATTGAGAGACTGGAAGGGCAATGTGAACAGCTGGCAGGTAGTGCCAACTGCTTCCTGGGCATTGTATCATCAATGCATTCCAGATTTAGTGCTTCTGACTCCAATAGGGTACTACTGCAATCTGAAGCCCTAAATGCAATGGGGACTGCTGAAGAACTCACAAAAGGAACAGACCCGAATGTAATATACCATATTTCCTTGGAAAATGCTGAGCAGAGGAAGTTGGATACTGCACTCTCTTATGCAAAGAAGCTGCTGAAACTTGAGGCTGGATCGGGTGCCAGAGCATGGATTCTTATAGCTCGAATATTGTCTGCTCAGAAGCGCTACGATGATGCAGAAACTATAGTCAATGCCGCGCTAGAGCAGACTGGTAAGTGGGAGCATGCTGAATTGTTGAGGACCAAGGCTAAACTCCAAATTGCTCAGGGACTGACGAAGAATGCTATACAGACATACACCCAACTTCTTGCAGTTCTCCAAGTTCGGAAGAAGAGCTTTGGTGTTGGGAAGAAGCTTCTAGAGGTAATTTGCTCCATTGCCTCTGCCACTAGTAATGGGCATGATGAATCTTTTTGTTTCAAAACAAGTGTTTTTCTACAATTCCAATGCAAAAATAAGTTGGACTTTCTTACTATATTCATTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52827.p1 GENE.S_Transcript_52827~~S_Transcript_52827.p1 ORF type:complete len:653 (+),score=124.42,TPR_19|PF14559.2|6.7,TPR_19|PF14559.2|78,TPR_19|PF14559.2|5.4e+03,TPR_19|PF14559.2|9.9e+02,TPR_19|PF14559.2|5.6e-07,TPR_19|PF14559.2|1.3e+02,TPR_16|PF13432.2|4.3,TPR_16|PF13432.2|39,TPR_16|PF13432.2|8.6e+03,TPR_16|PF13432.2|1.5e+03,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|7.7e+03,TPR_2|PF07719.13|66,TPR_2|PF07719.13|4.9,TPR_2|PF07719.13|3.5e+02,TPR_2|PF07719.13|25,TPR_2|PF07719.13|86,TPR_2|PF07719.13|0.13,TPR_2|PF07719.13|2.9e+02,TPR_12|PF13424.2|2.8e+02,TPR_12|PF13424.2|2.6e+02,TPR_12|PF13424.2|1.2e+03,TPR_12|PF13424.2|10,TPR_12|PF13424.2|36,TPR_12|PF13424.2|1.2e-05,TPR_14|PF13428.2|8.8,TPR_14|PF13428.2|2.5e+02,TPR_14|PF13428.2|5.1e+03,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|0.01,TPR_14|PF13428.2|7.2e+02,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|1.6e+04,TPR_8|PF13181.2|48,TPR_8|PF13181.2|11,TPR_8|PF13181.2|40,TPR_8|PF13181.2|1.7e+03,TPR_8|PF13181.2|7.4e+02,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|0.73,TPR_8|PF13181.2|6.5e+02 S_Transcript_52827:1166-3124(+)
MVYIILGQFYKSLSNRSSDILCFLHRGMKEVLFSVMTAKHQTRRRVSGFRLRLKKMMKCIFLGKQVRVDEAVESSESSLATRDYSTSGHMARVDEVDRKTNSNTIEEAESTLRESGYLNYEEARALLGRLEYQKGNVEAAFRVFEGIDIEAITPNIKVSLARRGEPQRRHSQSDVVPPMSMHAISLLFEAIFLKAKSLQTLGRFEEAAQSCQVILDTVESALPEGLNERMASNCKLQEILNNAVELLPELWKLAGSSNEAISSYRRALLYSWNLELQTQTRIEKEFAIFLLYSGIEASPLTLRFQAEGAYIPKNNIEEAILLLLLLLRKFLQRRIDWDPSIMDHLSFALSVSGDLGTLACQLEALPAETMNTKEKYRTLALCYHGEGEHQIALNLLRNLLSERENQNCTQELLLASKLCTEDARSSEEGITYAHKAIERLEGQCEQLAGSANCFLGIVSSMHSRFSASDSNRVLLQSEALNAMGTAEELTKGTDPNVIYHISLENAEQRKLDTALSYAKKLLKLEAGSGARAWILIARILSAQKRYDDAETIVNAALEQTGKWEHAELLRTKAKLQIAQGLTKNAIQTYTQLLAVLQVRKKSFGVGKKLLEVICSIASATSNGHDESFCFKTSVFLQFQCKNKLDFLTIFIH*

Click here to download the sequence:
Link to NCBI Protein BLAST