Transcript Information: S_Transcript_528506.p1


Annotated TAIR IDAT5G52020.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21124192-21124890 | Reverse length=232
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56323812137948
Replicate 20.23346867256629
Replicate 30.29274184259683
Condition 2: 8 Hour
Replicate 10
Replicate 20.11836956952236
Replicate 30.11278226246022
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_528506.p1 GENE.S_Transcript_528506~~S_Transcript_528506.p1 ORF type:3prime_partial len:189 (+),score=42.03,AP2|PF00847.16|1.3e-06 S_Transcript_528506:100-663(+)
ATGGCGTCGCCCTCGGAGGGCTCACCGTTGGGGTCAGGGTCATCCTGTGGGAGACATACAGAATACCGAGGGATCAGAAGCCGAGGGCGAAAGTGGGTGTCGGAGATCCGGGAACCAAGGAAGCCGACCCGAATATGGCTGGGAACATATCTGACACCAGAAATGGCTGCCACAGCTTATGACGTGGCAGCATTAGCCCTGAAAGGAAGCAATTATGCGGTTCTGAACTTCCCCCAGGATGCAGCCTGGTACCCTGTTCCTAAGTCTGGCTCCGCCGCTGACATACGCACCGCAGCCACTAATGCAGCTCTGATGAGGCAACAAAGATGTCAGGGCCAAACTGGTAGTCCTGCTAATAACAACAACAACAATGATAATCGGGTACAAGTACAAGAAGAAGAAGAAGAAAACCATGATCAGAATAAGGATCAGGAATATTATGTGGATTGGGATGACATGTTTGACATGCCTCATTTGCTGGATGATATGGCTAGAGCAATGATGGTCACTCCACCAAGGCTAACATTTAGCTCCGACGACGACGGTGGTGATGATTCAGGAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_528506.p1 GENE.S_Transcript_528506~~S_Transcript_528506.p1 ORF type:3prime_partial len:189 (+),score=42.03,AP2|PF00847.16|1.3e-06 S_Transcript_528506:100-663(+)
MASPSEGSPLGSGSSCGRHTEYRGIRSRGRKWVSEIREPRKPTRIWLGTYLTPEMAATAYDVAALALKGSNYAVLNFPQDAAWYPVPKSGSAADIRTAATNAALMRQQRCQGQTGSPANNNNNNDNRVQVQEEEEENHDQNKDQEYYVDWDDMFDMPHLLDDMARAMMVTPPRLTFSSDDDGGDDSGG

Click here to download the sequence:
Link to NCBI Protein BLAST