Transcript Information: S_Transcript_528607.p1


Annotated TAIR IDAT5G48600.2
Annotated Gene Namestructural maintenance of chromosome 3
Annotated Gene Symbol(s)SMC3
Annotation TypeOrtholog
Chromosome Positionchr5:19701908-19709091 | Forward length=1244
E-Value4.8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64127713819712
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_528607.p1 GENE.S_Transcript_528607~~S_Transcript_528607.p1 ORF type:3prime_partial len:83 (+),score=18.00,SMC_N|PF02463.15|2e-20,AAA_23|PF13476.2|5.3e+03,AAA_23|PF13476.2|1.6e-09,AAA_21|PF13304.2|4.4e-07,AAA_29|PF13555.2|1.6e-06,AAA_15|PF13175.2|3.1e-06 S_Transcript_528607:39-248(+)
ATGGAAATCTCTCCAGAAAAATTGCCCAAGGATAAAAATAAGGGCAGATTGATGATCCAGAAGATTGCGATGACCAATTTCAAATCATATGCAGGAACCAAAGAGATAGGACCATTCCATCACAATTTCTCTGCAATTGTAGGACCTAATGGATCTGGAAAATCTAATGTCATCGATTCCTTGCTTTTCGTCTTTGGAAAGAGAGCAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_528607.p1 GENE.S_Transcript_528607~~S_Transcript_528607.p1 ORF type:3prime_partial len:83 (+),score=18.00,SMC_N|PF02463.15|2e-20,AAA_23|PF13476.2|5.3e+03,AAA_23|PF13476.2|1.6e-09,AAA_21|PF13304.2|4.4e-07,AAA_29|PF13555.2|1.6e-06,AAA_15|PF13175.2|3.1e-06 S_Transcript_528607:39-248(+)
MEISPEKLPKDKNKGRLMIQKIAMTNFKSYAGTKEIGPFHHNFSAIVGPNGSGKSNVIDSLLFVFGKRAE

Click here to download the sequence:
Link to NCBI Protein BLAST