Transcript Information: S_Transcript_528609.p1


Annotated TAIR IDAT5G04430.2
Annotated Gene Namebinding to TOMV RNA 1L (long form)
Annotated Gene Symbol(s)BTR1, BTR1L
Annotation TypeHomolog
Chromosome Positionchr5:1250602-1253523 | Reverse length=334
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56027371021433
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.26549520426438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_528609.p1 GENE.S_Transcript_528609~~S_Transcript_528609.p1 ORF type:5prime_partial len:95 (+),score=1.59 S_Transcript_528609:3-287(+)
TTCCGCCACGTCCAACCACCACACCAATATGTTCATCAGCAACACCAATTGTCAAAGAGTTATTACGATCTTCCTACATGTTACCAATTAATATTAGGAAAGGCAAAAGGATATAGAACTCACAAACAAGCAAACAAAGTCACCCTTATATTAAACTACTATTTTAATCTGAAGCAGAGCCATATCTGGGTTTACTCAGCTAAGCTTTGTCCACAGGATGCCAAACTCAACCCAATAGAACAAAGAGAAAGCTCAGTGCCGAAGTATCAAAGAATGATACGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_528609.p1 GENE.S_Transcript_528609~~S_Transcript_528609.p1 ORF type:5prime_partial len:95 (+),score=1.59 S_Transcript_528609:3-287(+)
FRHVQPPHQYVHQQHQLSKSYYDLPTCYQLILGKAKGYRTHKQANKVTLILNYYFNLKQSHIWVYSAKLCPQDAKLNPIEQRESSVPKYQRMIR*

Click here to download the sequence:
Link to NCBI Protein BLAST