Transcript Information: S_Transcript_52868.p1


Annotated TAIR IDAT3G23100.1
Annotated Gene NameHomolog of human DNA ligase iv-binding protein XRCC4
Annotated Gene Symbol(s)XRCC4
Annotation TypeHomolog
Chromosome Positionchr3:8220721-8221991 | Forward length=264
E-Value5E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5798317523899
Replicate 21.5759135398225
Replicate 31.035051514896
Condition 2: 8 Hour
Replicate 14.2433174610622
Replicate 23.8808308864832
Replicate 33.1538754109411
Condition 3: 24 Hour
Replicate 12.451976718332
Replicate 23.1220556763336
Replicate 31.0294712002088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52868.p1 GENE.S_Transcript_52868~~S_Transcript_52868.p1 ORF type:5prime_partial len:196 (+),score=52.87,XRCC4|PF06632.8|1.8e+02,XRCC4|PF06632.8|5.5e-11 S_Transcript_52868:2-589(+)
CCAAAACACTCATGCATAAAGTTACAACTTCCAGAAGGAGAAGAAACAATCTTTGTAATGGCCACTTGGTTCCCTAATTCCCGTTTCTCTCTCTCCATCACTGATGGCCACCACTCTTGGCTTTGCAACGGGTTGCAGCAACCTGGTTCTGTTTACCGCTTCTCTGATGCTGGAAATGGCCATCGAAGGTTGTCATTTACATTTGAGAGGGAAGGCACAAAGATGGAATGGAGATGGAGATGTAAGTCATCACCCAATAGTAAGAAAACCACAGCAGACATCTTGAATTTTCTGATGGAGTCAAACATAAGACTAAGTGATGAAGTTGTCAAAAATAACCAGTTATGTAAGCAGTTGAAACAAGAAGCTGAGAAATGCTTGGAACAAAGTGAAAAGTTGAGCACTGAGAAAGAAAAGTTTGAATCTGATGTCTATGGAAAGTTTGTGAATGTGTTAAACTCCAAGAAGGCAAAACTCAGAGAGCTTCGTGACCGACTTTCAAAGGAAGAAGATAGTGGGAAGATGCTAGAAGAAGAGGAGGTCTCGACTGATGGAACTGAGCCATATCACAGTGAAAGTGATAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52868.p1 GENE.S_Transcript_52868~~S_Transcript_52868.p1 ORF type:5prime_partial len:196 (+),score=52.87,XRCC4|PF06632.8|1.8e+02,XRCC4|PF06632.8|5.5e-11 S_Transcript_52868:2-589(+)
PKHSCIKLQLPEGEETIFVMATWFPNSRFSLSITDGHHSWLCNGLQQPGSVYRFSDAGNGHRRLSFTFEREGTKMEWRWRCKSSPNSKKTTADILNFLMESNIRLSDEVVKNNQLCKQLKQEAEKCLEQSEKLSTEKEKFESDVYGKFVNVLNSKKAKLRELRDRLSKEEDSGKMLEEEEVSTDGTEPYHSESDR*

Click here to download the sequence:
Link to NCBI Protein BLAST