Transcript Information: S_Transcript_52869.p1


Annotated TAIR IDAT3G23100.1
Annotated Gene NameHomolog of human DNA ligase iv-binding protein XRCC4
Annotated Gene Symbol(s)XRCC4
Annotation TypeHomolog
Chromosome Positionchr3:8220721-8221991 | Forward length=264
E-Value4E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9380197772649
Replicate 24.8074560903534
Replicate 34.2339355211379
Condition 2: 8 Hour
Replicate 17.633991864499
Replicate 28.4438494865894
Replicate 38.5429272502454
Condition 3: 24 Hour
Replicate 14.6749750660805
Replicate 27.3194410927503
Replicate 35.1032930313854


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52869.p1 GENE.S_Transcript_52869~~S_Transcript_52869.p1 ORF type:complete len:257 (+),score=72.83,XRCC4|PF06632.8|5e+02,XRCC4|PF06632.8|1.7e-18 S_Transcript_52869:60-773(+)
ATGGAGCCTTCAGCTTCAACATCGAAACATGAAGAATCTCCACCAAAACACTCATGCATAAAGCTGCAACTTCCAGAAGGAGAAGAGACAATCTTTGTAATGGCCACTTGGTTCCCTAATTCCCGTTTCTCTCTCTCCATCACTGATGGCCACCACTCTTGGCTTTGTAATGCATCAGAGGAGGACGTGAGAGAAAGGGCAAGCCAGTGGGACCAGTCTGTTTCTGAATACATTCAATTTGCTGAGAATTATTTAGGGTTGCAGCAACCTGGTTCTGTTTACCGCTTCTCTGATGCTGGAAATGGCCATCGAAGGTTGTCATTTACATTTGAGAGGGAAGGCACAAAGATGGAATGGAGATGGAGATGTAAGTCATCACCCAATAGTAAGAAAACCACAGCAGACATCTTGAATTTTCTGATGGAGTCAAACATAAGACTAAGTGATGAAGTTGTCAAAAATAACCAGTTATGTAAGCAGTTGAAACAAGAAGCTGAGAAATGCTTGGAACAAAGTGAAAAGTTGAGTGCTGAGAAAGAAGAGTTTGAATCTGACATATATGGAAAGTTTGTGAATGTGTTAAACTCCAAGAAGGCAAAACTCAGAGAGCTTCGTGACCGACTTTCAAAGGAAGAAGATAGTGGGAAGATGCTAGAAGAAGAGGAGGTCTCGACTGATGGAACTGAGCCATATCACAGTGAAAGTGATAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52869.p1 GENE.S_Transcript_52869~~S_Transcript_52869.p1 ORF type:complete len:257 (+),score=72.83,XRCC4|PF06632.8|5e+02,XRCC4|PF06632.8|1.7e-18 S_Transcript_52869:60-773(+)
MEPSASTSKHEESPPKHSCIKLQLPEGEETIFVMATWFPNSRFSLSITDGHHSWLCNASEEDVRERASQWDQSVSEYIQFAENYLGLQQPGSVYRFSDAGNGHRRLSFTFEREGTKMEWRWRCKSSPNSKKTTADILNFLMESNIRLSDEVVKNNQLCKQLKQEAEKCLEQSEKLSAEKEEFESDIYGKFVNVLNSKKAKLRELRDRLSKEEDSGKMLEEEEVSTDGTEPYHSESDR*

Click here to download the sequence:
Link to NCBI Protein BLAST