Transcript Information: S_Transcript_52899.p1


Annotated TAIR IDAT1G58450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR6
Annotation TypeHomolog
Chromosome Positionchr1:21718014-21718916 | Forward length=164
E-Value5E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.82060444347
Replicate 230.746136451637
Replicate 328.367742650679
Condition 2: 8 Hour
Replicate 142.565136496446
Replicate 258.400408095672
Replicate 355.900596329529
Condition 3: 24 Hour
Replicate 121.406231211667
Replicate 212.014550715172
Replicate 346.189768067201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52899.p1 GENE.S_Transcript_52899~~S_Transcript_52899.p1 ORF type:complete len:249 (+),score=32.68,TPR_11|PF13414.2|3.7e-10,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|0.76,TPR_1|PF00515.24|0.44,TPR_1|PF00515.24|0.013,TPR_1|PF00515.24|0.017,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.11,TPR_2|PF07719.13|0.012 S_Transcript_52899:189-935(+)
ATGTATACCTTGAAATTCAAAGAGAAAGGGAACTTTTATTATGGGCGAAAGGATTTTGTCAATGCTATTATATGTTACGCGAAAGCTTCTGATATTTTTTCAATTGCTTTCTCTTTGAAAATTGAGGATGAGAGGTTGTTTAGAGAACTGGATGTGCAATTGAATCTTAATTTAGCTGCCTGCTCCTTGAAATTACATAATAATGAGGATGCGGTGAACTACTGCTCGTTGGTGTTAAAAATTGATCCTCTCAATGTTAAGGCTTTTTTTAGAAGGGCTATGGCACTGGTGAATCTAGGTCGTTTATTAGAGGCACATTCAGATTTGATAATGGCTCTGAAGTTGGAACCAGAAAACAAGGAAATCAAAAGGGAATTAGCAAGTGCTGAAGAATCCCTAAACTCTTCACAAAGTCAGAATGGATCACAGGGTCTAGCAGGAGCCAGTGTTTTAAGAGATTATAAGAAGAGGAAAAATTGCAAAAAACAGTTGAATTTGGAGGATACATTGCATAGGCCGCTGAGAACAGAAGTTATGACTAATCTTGACCACAACATGGAGAGTAATCAAGGCCTGAAAGTGATTCAACTTCAGTTTCTTCTAATTCTATTTGGGAAATGTCGGACGAATGTGGTCCTAGTTATTTGGGTCCTGACAATCGTGTTGAGTTGCCAGTTGTCAGTGATAAGGCAATTGCAGAGTCCACATGCCGGTTTGTTAACCGACATAGAAAGGACTTCTCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52899.p1 GENE.S_Transcript_52899~~S_Transcript_52899.p1 ORF type:complete len:249 (+),score=32.68,TPR_11|PF13414.2|3.7e-10,TPR_11|PF13414.2|0.0003,TPR_11|PF13414.2|0.76,TPR_1|PF00515.24|0.44,TPR_1|PF00515.24|0.013,TPR_1|PF00515.24|0.017,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.11,TPR_2|PF07719.13|0.012 S_Transcript_52899:189-935(+)
MYTLKFKEKGNFYYGRKDFVNAIICYAKASDIFSIAFSLKIEDERLFRELDVQLNLNLAACSLKLHNNEDAVNYCSLVLKIDPLNVKAFFRRAMALVNLGRLLEAHSDLIMALKLEPENKEIKRELASAEESLNSSQSQNGSQGLAGASVLRDYKKRKNCKKQLNLEDTLHRPLRTEVMTNLDHNMESNQGLKVIQLQFLLILFGKCRTNVVLVIWVLTIVLSCQLSVIRQLQSPHAGLLTDIERTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST