Transcript Information: S_Transcript_52922.p1


Annotated TAIR IDAT2G32590.1
Annotated Gene NameLOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13829420-13833209 | Reverse length=671
E-Value7.6E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7200969468532
Replicate 22.8468115558084
Replicate 32.7763258620474
Condition 2: 8 Hour
Replicate 13.898189627863
Replicate 26.2544953186332
Replicate 35.5008638980597
Condition 3: 24 Hour
Replicate 11.6442385423028
Replicate 22.436968986704
Replicate 33.7968668996949


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52922.p1 GENE.S_Transcript_52922~~S_Transcript_52922.p1 ORF type:complete len:93 (+),score=11.56,Cnd2|PF05786.10|2.3e-16 S_Transcript_52922:32-310(+)
ATGCAAGGATCACTCCAGACACCTGAAAATGAAACAAGTTTTCTCACAAAGGATGCCGTATCTTTCAAACATATACTAGCGACCTTTCCCGATGATTGCCATGCTGCTGCATTCCAGGACATCTCCCCTCATCTATGTTTCATTTGTGTCCTGCATCTTGCAAATGAACACGGATTGATAATCAAAGGCTCCCCCAAATTGGACGACCTTAGAATTCACATTCCTTTTGCATATGAGAACAAAGGCAGTAACTCGGGTGAAGTTACTCAAGCATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52922.p1 GENE.S_Transcript_52922~~S_Transcript_52922.p1 ORF type:complete len:93 (+),score=11.56,Cnd2|PF05786.10|2.3e-16 S_Transcript_52922:32-310(+)
MQGSLQTPENETSFLTKDAVSFKHILATFPDDCHAAAFQDISPHLCFICVLHLANEHGLIIKGSPKLDDLRIHIPFAYENKGSNSGEVTQAF*

Click here to download the sequence:
Link to NCBI Protein BLAST