Transcript Information: S_Transcript_52962.p1


Annotated TAIR IDAT1G16520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5648904-5650998 | Forward length=325
E-Value1.3E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.557401151423
Replicate 225.130692247465
Replicate 328.809954592133
Condition 2: 8 Hour
Replicate 127.0037486856
Replicate 223.497059961843
Replicate 323.081657465749
Condition 3: 24 Hour
Replicate 134.835479885888
Replicate 232.319399940235
Replicate 330.744030458307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52962.p1 GENE.S_Transcript_52962~~S_Transcript_52962.p1 ORF type:complete len:338 (+),score=63.15 S_Transcript_52962:284-1297(+)
ATGTCGCAGAATGGTGGAGGTCCAGATTTCCACCTCCCAGACGATGTGTTGGCCGTAATTCCAACAGACCCCTACGACCAGCTTGATTTAGCTCGCAAAATCACGTCAATGGCCATCGCTTCTCGAGTCTCGAAACTCGATTCTGAGACCACCAGGCTTAAGCAGCAAGTCCATGACCAGGACCGTCTCATTTTCGAGCTTGAAGAGAAAGCCTCAAATCTTCAGCAAGCTGTTTTCGACGCTGATTCTCGCTTGAAGACCGTTCTTGACGAAAATATGAGATTGGTACAGGAGAGAGATTCATTGGCTGGGTCTGTCAAGAAGTTGAGCCGTGACTTGGGAAAGCTTGAGACATTTAAGAGACAACTCATGCAGTCACTCAGTGAAGAGACTTCCTCTGCTGAAACTGTTGATATTGGGACATGTGATCAACCAGTTCCCAGAGCATATCCAGACAAAGATGATGGTATAAATGGGTATACAAGACACCATTCTTTTACTGGCTCTAATGAAGTAAGACATATGAGTGATGAAGTATCGAAGCAAGGAGGTCAAAGATTTTCAATGACTCCATATCAAATCACACCTAGGCTTACACCTACTGGAACACCTAAAATCGTTTCTACTACTGGTTCCCCCAGAGCTTATTCTGCTGTTGGATCACCTCAGAAAAACTCGGGGGCCACAACACCAACCAAATCACAATATGAAGGACGAACATCACTGTCAGCATGGTATCCATCGAGTCAGCAGTCATCAGCAGCCAATTCGCCACCTCGTGTTCGCGCATTGCCAGGTCGAACTCCCCGAATTGATGGAAAGGAGTTTTTCCGGCAGGCACGGAGCCGTTTGGAATATGAGCAGTTCAGTGCTTTTCTAGCAAACATCAAGGAACTAAATGCTCAAAAGCAAACACGGGAGGAAACCTTGAGGAAAGCTGAGGAAATATTTGGTGTGGATAACAAAGATCTTTACATCTCGTTTCAAGGACTCCTCAACCGCAACATGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52962.p1 GENE.S_Transcript_52962~~S_Transcript_52962.p1 ORF type:complete len:338 (+),score=63.15 S_Transcript_52962:284-1297(+)
MSQNGGGPDFHLPDDVLAVIPTDPYDQLDLARKITSMAIASRVSKLDSETTRLKQQVHDQDRLIFELEEKASNLQQAVFDADSRLKTVLDENMRLVQERDSLAGSVKKLSRDLGKLETFKRQLMQSLSEETSSAETVDIGTCDQPVPRAYPDKDDGINGYTRHHSFTGSNEVRHMSDEVSKQGGQRFSMTPYQITPRLTPTGTPKIVSTTGSPRAYSAVGSPQKNSGATTPTKSQYEGRTSLSAWYPSSQQSSAANSPPRVRALPGRTPRIDGKEFFRQARSRLEYEQFSAFLANIKELNAQKQTREETLRKAEEIFGVDNKDLYISFQGLLNRNMH*

Click here to download the sequence:
Link to NCBI Protein BLAST