Transcript Information: S_Transcript_52978.p1


Annotated TAIR IDAT1G32630.1
Annotated Gene Nameunknown protein; Has 18 Blast hits to 18 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 12; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11797942-11798343 | Forward length=133
E-Value3.5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.670479173829
Replicate 219.322070357823
Replicate 314.089792163248
Condition 2: 8 Hour
Replicate 122.649948721924
Replicate 220.148559333915
Replicate 321.315847604981
Condition 3: 24 Hour
Replicate 116.553265750637
Replicate 216.751512904257
Replicate 316.135842072838


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52978.p1 GENE.S_Transcript_52978~~S_Transcript_52978.p1 ORF type:complete len:161 (+),score=27.14 S_Transcript_52978:487-969(+)
ATGGAGTCTTCTGATCAAATCCAAGGCAGCAAAACCCTCAATGATGTCATGTATCGTCGGCTTAAAAACCGAGAACGACAACGTAGATACAGGGAGCGGAAACGTCTTCGAGCAGATGCAGGCAAGACTTGTATCACTGATCAGTCATCCCAATTGCAGATTGTACCATTGCAGGTTGTACCATTGCTAACAAATGGGACTGTAGAACAAGTTGTCACTCGTGTCCATTGTACGCGTGACTGGAAAAAGGATGCAAGGAGGGTCCACACAGCTAAACAAGCAGCCGTATGCAATGCTTATACCAACAGTCAGTCTTTAGGAGCAGAGAATCTTTCTTGTGGTGTTCAGGAACCAGAGCAAAATCTAAACAGTGAGGTTCCTTCAACAAATTCCTCTCGCCCTGACGATCATGACAAATTCAGAAGTAAACGAGGGAGAAGAGACTGGAAAGCAGAAGCAAGAAAGAACTTAAGAAGTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52978.p1 GENE.S_Transcript_52978~~S_Transcript_52978.p1 ORF type:complete len:161 (+),score=27.14 S_Transcript_52978:487-969(+)
MESSDQIQGSKTLNDVMYRRLKNRERQRRYRERKRLRADAGKTCITDQSSQLQIVPLQVVPLLTNGTVEQVVTRVHCTRDWKKDARRVHTAKQAAVCNAYTNSQSLGAENLSCGVQEPEQNLNSEVPSTNSSRPDDHDKFRSKRGRRDWKAEARKNLRSS*

Click here to download the sequence:
Link to NCBI Protein BLAST