Transcript Information: S_Transcript_52988.p1


Annotated TAIR IDAT1G50700.1
Annotated Gene Namecalcium-dependent protein kinase 33
Annotated Gene Symbol(s)CPK33
Annotation TypeOrtholog
Chromosome Positionchr1:18782214-18784385 | Forward length=521
E-Value7.5E-281
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.923885583858
Replicate 212.758354344761
Replicate 313.139712928572
Condition 2: 8 Hour
Replicate 115.568216253881
Replicate 214.116422065003
Replicate 313.450095533495
Condition 3: 24 Hour
Replicate 113.714120146651
Replicate 215.603998066143
Replicate 313.819746375327


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52988.p1 GENE.S_Transcript_52988~~S_Transcript_52988.p1 ORF type:5prime_partial len:626 (+),score=147.49,Pkinase|PF00069.21|4e+03,Pkinase|PF00069.21|2.7e-74,EF-hand_1|PF00036.28|8.3e+03,EF-hand_1|PF00036.28|2.1e-05,EF-hand_1|PF00036.28|1.2e-05,EF-hand_1|PF00036.28|7.8e-07,EF-hand_1|PF00036.28|1.6e-08,Pkinase_Tyr|PF07714.13|2.5e+03,Pkinase_Tyr|PF07714.13|5.3e-30,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|4.2e-11,EF-hand_6|PF13405.2|4.8e+03,EF-hand_6|PF13405.2|0.0009,EF-hand_6|PF13405.2|0.075,EF-hand_6|PF13405.2|1.1e-06,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|0.00039,EF-hand_5|PF13202.2|0.0031,EF-hand_5|PF13202.2|0.00093,EF-hand_5|PF13202.2|0.0039,EF-hand_8|PF13833.2|0.046,EF-hand_8|PF13833.2|4.6e-07,EF-hand_8|PF13833.2|4.3e-09,EF-hand_4|PF12763.3|1.8e+03,EF-hand_4|PF12763.3|0.0081,EF-hand_4|PF12763.3|0.008,EF-hand_9|PF14658.2|0.046,EF-hand_9|PF14658.2|0.09,Kinase-like|PF14531.2|1e+04,Kinase-like|PF14531.2|1e+02,Kinase-like|PF14531.2|2.9e-05,LisH|PF08513.7|1.3e-05 S_Transcript_52988:1-1878(+)
CAATTTTTTTTCGCAATCATGTCGCAGACCAACTGGGAAGCCGATAAAATGTTGGATGTTTATATTCATGATTATTTTGTCAAGAGAGAACTACCTGCTTCTGCTAAAGCATTTCGGCAAGAGGGGAAGGTATCTACAGACCCTGTTGCGATTGATGCTCCAGGTGGTTTTCTTTTTGAGTGGTGGTCAGTGTTTTGGGATATATTCATTGCAAGGACTAATGAAAAACACTCAGATGCAGCAGCCTCCTATATTGAGACTCAAATATCAAAAGCGAGGGAGCAGCAACAAAAGTCACAACATCAACAAATGCACACGCAGCAACTGTTGATGCAGAGGCAGGTTCAGCAACAGCAACAGCAACAACAGCAGCAGCAGCAGCAACAACAGCAACAAAGGTATAATAATAATCAATCACAATCTCAATGTGTTAATTCATCTGCATTGAAGCCAAAACCTAGGCTAGCTATAGCTGCACCACCTCCTGATACAATATTAGGAAAACCCTTTGAAGATGTAAGGTCACGTTATATACTTGGTAAAGAACTGGGTAGAGGTCAATTTGGGATTACATATTTGTGTACTGAGAATTCAACTGGTCAAACATATGCTTGTAAGTCTATATTAAAGAGGAAATTGGTGAGTAAGAGTGATAAGGAGGATATCAAGAGGGAAATTCAGATATTACAGCATTTGTCGGGGCAGGCTAATATTGTGGAGTTTAAGGGTGTTTATGAAGATAGACAATCTGTTCATGTGGTAATGGAACTTTGTGCTGGAGGAGAATTGTTTGACAGGATTATTGCTCAAGGGCATTATTCGGAACGAGCGGCCGCTTCCATTTGTAGGCAGATTGTTAGGGTTGTCCACATTTGCCATTACATGGGTGTAATGCACCGCGATCTTAAGCCGGAGAATTTCTTGTTGTCTAGCAAAGATGAAGGTGCTATGTTGAAGGCAACTGATTTCGGGTTGTCCATGTTCATAGAAGAAGGGAAGGTCTACCGTGATGTTGTGGGAAGTGCTTACTATGTTGCTCCTGAAGTACTTCGAAGAAGTTATGGGAAGGAAATAGATGTATGGAGTGCAGGAATTATGCTTTATATTCTACTCAGTGGTGTCCCTCCTTTCTGGGCTGAATCTGAGAGAGGCATGTTTGATGCCATACTGAATGGAGAAATTGACTTCCAAAGCGACCCATGGCCATCCATATCAGATAGTGCGAAGGACCTGGTTAGGAGGATGTTGAACCTGGATCCAAAGAAACGGATCACCGCTGCTGAAGTTCTTGAGCATCCATGGATGAGAGAGGGTGGAAACGCATCAGACAAGCCAATTGATAGTGCTGTGCTGTCTAGAATGAAACAGTTCAGGGCAATGAACAAGCTGAAGAAGCTTGCTCTGAAGGTCATTGCAGACAATATGTCTGAAGAGGAAATAAAGGGTCTCAAAGCCATGTTTATTAACATGGACACAGACAAGAGTGGCTCAATCACTTATGAAGAGCTAAAAAGAGGATTGGCTGAGCTTGGTTCAAAGCTTACCGAGGCCGAAGTCAAGCAACTTATGGAGGCTGCTGATGTGGACGGAAATGGAACCATTGATTACAGTGAATTTATCACTGCAACTATGAATAGACATAGACTGGAAACCGATGAAAATCTTTTGAAAGCATTCCAACATTTTGACAAGGATAATAGTGGGTTTATAACAACAGATGAACTGGAAATTGCCATGAAGGAATATGGAATCGGTGATGAAAGCAGCATCAAGGAAATTCTCTCTGAAGTTGATACCGATAATGATGGACGAATCAACTATGACGAATTTTGCACAATGATGAGAAGCGGTACAAAGCAACAAGTAAAACTCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52988.p1 GENE.S_Transcript_52988~~S_Transcript_52988.p1 ORF type:5prime_partial len:626 (+),score=147.49,Pkinase|PF00069.21|4e+03,Pkinase|PF00069.21|2.7e-74,EF-hand_1|PF00036.28|8.3e+03,EF-hand_1|PF00036.28|2.1e-05,EF-hand_1|PF00036.28|1.2e-05,EF-hand_1|PF00036.28|7.8e-07,EF-hand_1|PF00036.28|1.6e-08,Pkinase_Tyr|PF07714.13|2.5e+03,Pkinase_Tyr|PF07714.13|5.3e-30,EF-hand_7|PF13499.2|9.6e-13,EF-hand_7|PF13499.2|4.2e-11,EF-hand_6|PF13405.2|4.8e+03,EF-hand_6|PF13405.2|0.0009,EF-hand_6|PF13405.2|0.075,EF-hand_6|PF13405.2|1.1e-06,EF-hand_6|PF13405.2|0.0019,EF-hand_5|PF13202.2|0.00039,EF-hand_5|PF13202.2|0.0031,EF-hand_5|PF13202.2|0.00093,EF-hand_5|PF13202.2|0.0039,EF-hand_8|PF13833.2|0.046,EF-hand_8|PF13833.2|4.6e-07,EF-hand_8|PF13833.2|4.3e-09,EF-hand_4|PF12763.3|1.8e+03,EF-hand_4|PF12763.3|0.0081,EF-hand_4|PF12763.3|0.008,EF-hand_9|PF14658.2|0.046,EF-hand_9|PF14658.2|0.09,Kinase-like|PF14531.2|1e+04,Kinase-like|PF14531.2|1e+02,Kinase-like|PF14531.2|2.9e-05,LisH|PF08513.7|1.3e-05 S_Transcript_52988:1-1878(+)
QFFFAIMSQTNWEADKMLDVYIHDYFVKRELPASAKAFRQEGKVSTDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDAAASYIETQISKAREQQQKSQHQQMHTQQLLMQRQVQQQQQQQQQQQQQQQQQRYNNNQSQSQCVNSSALKPKPRLAIAAPPPDTILGKPFEDVRSRYILGKELGRGQFGITYLCTENSTGQTYACKSILKRKLVSKSDKEDIKREIQILQHLSGQANIVEFKGVYEDRQSVHVVMELCAGGELFDRIIAQGHYSERAAASICRQIVRVVHICHYMGVMHRDLKPENFLLSSKDEGAMLKATDFGLSMFIEEGKVYRDVVGSAYYVAPEVLRRSYGKEIDVWSAGIMLYILLSGVPPFWAESERGMFDAILNGEIDFQSDPWPSISDSAKDLVRRMLNLDPKKRITAAEVLEHPWMREGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIADNMSEEEIKGLKAMFINMDTDKSGSITYEELKRGLAELGSKLTEAEVKQLMEAADVDGNGTIDYSEFITATMNRHRLETDENLLKAFQHFDKDNSGFITTDELEIAMKEYGIGDESSIKEILSEVDTDNDGRINYDEFCTMMRSGTKQQVKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST