Transcript Information: S_Transcript_52993.p1


Annotated TAIR IDAT1G50700.1
Annotated Gene Namecalcium-dependent protein kinase 33
Annotated Gene Symbol(s)CPK33
Annotation TypeOrtholog
Chromosome Positionchr1:18782214-18784385 | Forward length=521
E-Value3.5E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3410261290919
Replicate 22.4832576991142
Replicate 33.1935473737836
Condition 2: 8 Hour
Replicate 12.2156249680138
Replicate 22.5180435698394
Replicate 32.2146335174007
Condition 3: 24 Hour
Replicate 12.8369978559213
Replicate 23.0414638911981
Replicate 32.8388448248183


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52993.p1 GENE.S_Transcript_52993~~S_Transcript_52993.p1 ORF type:5prime_partial len:231 (+),score=54.57,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|3.3e-06,EF-hand_1|PF00036.28|2.2e-07,EF-hand_1|PF00036.28|4.3e-09,EF-hand_7|PF13499.2|1.8e-13,EF-hand_7|PF13499.2|9.2e-12,EF-hand_6|PF13405.2|0.00024,EF-hand_6|PF13405.2|9.7e+02,EF-hand_6|PF13405.2|0.022,EF-hand_6|PF13405.2|3e-07,EF-hand_6|PF13405.2|0.00049,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|0.0009,EF-hand_5|PF13202.2|0.00027,EF-hand_5|PF13202.2|0.0011,EF-hand_8|PF13833.2|0.012,EF-hand_8|PF13833.2|1e-07,EF-hand_8|PF13833.2|36,EF-hand_8|PF13833.2|8.8e-10,EF-hand_4|PF12763.3|1.8e+03,EF-hand_4|PF12763.3|0.0018,EF-hand_4|PF12763.3|0.0021,SPARC_Ca_bdg|PF10591.5|0.008,SPARC_Ca_bdg|PF10591.5|0.00064,EF-hand_9|PF14658.2|0.0099,EF-hand_9|PF14658.2|0.02 S_Transcript_52993:2-694(+)
CGTTGCTCTCTCCGGCGTCATCCCTCTGTTCCTCTTCCTCTGGGCACTCCCTCCGACCTCTCGCTGCAGCTCTCTCAGTCTCTCATCGTAACCTCAACACACGAAGAGCATATATGGATGAGAGAGGGTGGAAATGCATCAGACAGGCCAATTGATAGTGCTGTGCTCTCTAGAATGAAACAGTTCAGGGCAATGAACAAGCTGAAGAAGCTTGCTCTGAAGGTCATTGCAGACAATATGTCTGAAGAGGAAATAAAGGGTCTCAAAGCCATGTTTATTAACATGGACACAGACAAGAGTGGCTCAATCACTTATGAAGAGCTAAAAAGAGGATTGGCTGAGCTTGGTTCAAAGCTTACCGAGGCCGAAGTCAAGCAACTTATGGAGGCTGCTGATGTGGACGGAAATGGAACCATTGATTACAGTGAATTTATCACTGCAACTATGAATAGACATAGACTGGAAACCGATGAAAATCTTTTGAAAGCATTCCAACATTTTGACAAGGATAATAGTGGGTTTATAACAACAGATGAACTGGAAATTGCCATGAAGGAATATGGAATCGGTGATGAAAGCAGCATCAAGGAAATTCTCTCTGAAGTTGATACCGATAATGATGGACGAATCAACTATGACGAATTTTGCACAATGATGAGAAGCGGTACAAAGCAACAAGTAAAACTCTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52993.p1 GENE.S_Transcript_52993~~S_Transcript_52993.p1 ORF type:5prime_partial len:231 (+),score=54.57,EF-hand_1|PF00036.28|5.6e-06,EF-hand_1|PF00036.28|3.3e-06,EF-hand_1|PF00036.28|2.2e-07,EF-hand_1|PF00036.28|4.3e-09,EF-hand_7|PF13499.2|1.8e-13,EF-hand_7|PF13499.2|9.2e-12,EF-hand_6|PF13405.2|0.00024,EF-hand_6|PF13405.2|9.7e+02,EF-hand_6|PF13405.2|0.022,EF-hand_6|PF13405.2|3e-07,EF-hand_6|PF13405.2|0.00049,EF-hand_5|PF13202.2|0.00011,EF-hand_5|PF13202.2|0.0009,EF-hand_5|PF13202.2|0.00027,EF-hand_5|PF13202.2|0.0011,EF-hand_8|PF13833.2|0.012,EF-hand_8|PF13833.2|1e-07,EF-hand_8|PF13833.2|36,EF-hand_8|PF13833.2|8.8e-10,EF-hand_4|PF12763.3|1.8e+03,EF-hand_4|PF12763.3|0.0018,EF-hand_4|PF12763.3|0.0021,SPARC_Ca_bdg|PF10591.5|0.008,SPARC_Ca_bdg|PF10591.5|0.00064,EF-hand_9|PF14658.2|0.0099,EF-hand_9|PF14658.2|0.02 S_Transcript_52993:2-694(+)
RCSLRRHPSVPLPLGTPSDLSLQLSQSLIVTSTHEEHIWMREGGNASDRPIDSAVLSRMKQFRAMNKLKKLALKVIADNMSEEEIKGLKAMFINMDTDKSGSITYEELKRGLAELGSKLTEAEVKQLMEAADVDGNGTIDYSEFITATMNRHRLETDENLLKAFQHFDKDNSGFITTDELEIAMKEYGIGDESSIKEILSEVDTDNDGRINYDEFCTMMRSGTKQQVKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST