Transcript Information: S_Transcript_52997.p1


Annotated TAIR IDAT1G18890.1
Annotated Gene Namecalcium-dependent protein kinase 1
Annotated Gene Symbol(s)ATCDPK1, CPK10, CDPK1, AtCPK10
Annotation TypeOrtholog
Chromosome Positionchr1:6523468-6525736 | Reverse length=545
E-Value1e-321
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.26543117124
Replicate 216.37685459439
Replicate 315.22664167396
Condition 2: 8 Hour
Replicate 123.958154553816
Replicate 225.06475634636
Replicate 323.782959596299
Condition 3: 24 Hour
Replicate 116.619641297628
Replicate 214.444682378135
Replicate 312.766713834688


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52997.p1 GENE.S_Transcript_52997~~S_Transcript_52997.p1 ORF type:5prime_partial len:648 (+),score=117.90,Pkinase|PF00069.21|6.1e-76,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|0.00025,EF-hand_1|PF00036.28|2.3e-05,EF-hand_1|PF00036.28|3.3e-09,Pkinase_Tyr|PF07714.13|9.2e-29,EF-hand_6|PF13405.2|2e-06,EF-hand_6|PF13405.2|0.53,EF-hand_6|PF13405.2|2.1e-06,EF-hand_6|PF13405.2|0.00054,EF-hand_7|PF13499.2|8.1e-11,EF-hand_7|PF13499.2|1.2e-11,EF-hand_8|PF13833.2|0.0001,EF-hand_8|PF13833.2|1.2e-05,EF-hand_8|PF13833.2|0.08,EF-hand_8|PF13833.2|1.8e-10,EF-hand_5|PF13202.2|5.5e-05,EF-hand_5|PF13202.2|1.3,EF-hand_5|PF13202.2|0.028,EF-hand_5|PF13202.2|2.3e-05,EF-hand_4|PF12763.3|0.006,EF-hand_4|PF12763.3|0.024,Kdo|PF06293.10|4.8e-06,EF-hand_9|PF14658.2|0.29,EF-hand_9|PF14658.2|0.033 S_Transcript_52997:1-1944(+)
CCCTCACCAAAACTTCTTCAATCAAATATCACATTTATATTCTTTTCTCTAAATACTCAACAAATTATCCAACCTCTTCTCACTGAAAACACCATCCAATCTAACACTTTTTTTTTCATAATACTTTATTTATTCAAGCTAATTCCACCAACTTTTTTATATTTTTTTTTTGAAGATCCCCTGTTCTTTTCTCAACTGATCCGCCATTCAGTCTTTCTTCTCCAATTGCCCCTCATCCATTTCTCACATCCTTCTCTTTCCTTAGCCAAATTCGCAAGTGGGTTTTCATCAATTTCACAAAAAACCTTCTCTTTGATGGGGAATATCTGTGTTTGCATCAGACCAGAGGAAACAGAGCAACAAAAACAGAGGAACCAAAAGAACAAGAAAAAAAACCGGACCAACCCATATGCAATATCCCAAACCCAACCGGCCCCAATCCGGGTACTAAAAGACATAGTCCCAGGGGTCGGGCCGCGGATCAGTGATAAATATGTGATAGGCCGGGAGCTAGGCCGGGGTGAATTTGGGGTAACATATTTATGCACAGACCGGGAGACCAAAGACCGGTTGGCTTGTAAATCAATATCAAAAAGGAAGCTAAGAACCGCGGTTGATGTGGAGGATGTAAGAAGAGAAGTTGCTATTATGTCAACTCTGCCGGTTCACCCGAATGTGGTCCGGTTGAAGGCGGTTTATGAAGATAATGAGGCGGTTCATTTAGTGATGGAACTTTGTGAAGGAGGAGAGTTGTTTGATAGAATTGTGGCAAGAGGACATTACTCAGAAAGAGCAGCAGCTGGGGTTGCTAAAACAATAGCAGAAGTAGTGAAGATGTGTCATGATAATGGAGTTATGCATAGAGATTTGAAGCCTGAGAATTTCTTGTTTGCTAATAAGAAGGAGAATTCTGCTTTGAAGGCTATTGATTTTGGCCTCTCTGTTTTCTTCCGCCCTGGGGAGACGTTTAGAGAGATAGTTGGAAGTCCATACTATATGGCCCCAGAGGTTTTAAAGAGGAATTATGGTCCTGAAGTTGATGTATGGAGTGCTGGAGTTATTCTATACATTCTCCTTTGTGGTGTTCCTCCTTTTTGGGCAGAGACTGAGCAAGGAGTTGCACTTGCAATATTAAGAGGAAAGCTCGATTTTAAGAGGGAACCATGGCCTCAAATCTCCGAAAGCGCAAAGAGCTTAGTGAAGCAAATGTTGGAGCCTGATCCCAAGAAGCGATTGACTGCTCAACAAGTTCTTGAACATCCTTGGATACAGAATGCAAAGAAAGCTCCAAATGTCCCACTTGGAGACATTGTCAGGACAAGACTCAAGCAGTTTGCAGGCATGAACAGATTCAAGAAGAGAGCATTGAGGGTCATAGCAGAACATTTATCAGTAGAAGAGGTGGAAGTTATAAGGGATATGTTTGCGCTCATGGATAGTGACCGTGATGGAAAAGTGACATACGAGGAATTGAAGGCTGGTCTCCGAAAGGTTGGTTCCCAACTGGGTGAGCCTGAGATAAAGCTTCTTATGGATGTGGCTGATGTGGATGGAAATGGGTACCTGGATTATGGAGAATTTGTGGCGGTGACAATCCATTTGCAGAAAATGGAGAATGATGAGCATTTTCACAGAGCATTCATGTACTTTGACAAAGATGAAAGTGGTTACATTGAACTAGATGAGTTAAGGGATGCCTTGAATGACGAGTCAGGGGAAACTGATGACGATGTTCTAAATGAGATTATGCGCGAAGTTGATACTGATAAGGATGGTCGAATAAGTTATGAAGAGTTCGTAGCAATGATGAAAACTGGGACGGATTGGAGAAAGGCTTCTAGGCAGTACTCAAGGGAAAGATTCAAGAGCTTAAGCATCAACCTGATGAAAGACGGTTCACTACAGCTACAGGATGGTATCAGTGGTCAAACTGTCACAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52997.p1 GENE.S_Transcript_52997~~S_Transcript_52997.p1 ORF type:5prime_partial len:648 (+),score=117.90,Pkinase|PF00069.21|6.1e-76,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|0.00025,EF-hand_1|PF00036.28|2.3e-05,EF-hand_1|PF00036.28|3.3e-09,Pkinase_Tyr|PF07714.13|9.2e-29,EF-hand_6|PF13405.2|2e-06,EF-hand_6|PF13405.2|0.53,EF-hand_6|PF13405.2|2.1e-06,EF-hand_6|PF13405.2|0.00054,EF-hand_7|PF13499.2|8.1e-11,EF-hand_7|PF13499.2|1.2e-11,EF-hand_8|PF13833.2|0.0001,EF-hand_8|PF13833.2|1.2e-05,EF-hand_8|PF13833.2|0.08,EF-hand_8|PF13833.2|1.8e-10,EF-hand_5|PF13202.2|5.5e-05,EF-hand_5|PF13202.2|1.3,EF-hand_5|PF13202.2|0.028,EF-hand_5|PF13202.2|2.3e-05,EF-hand_4|PF12763.3|0.006,EF-hand_4|PF12763.3|0.024,Kdo|PF06293.10|4.8e-06,EF-hand_9|PF14658.2|0.29,EF-hand_9|PF14658.2|0.033 S_Transcript_52997:1-1944(+)
PSPKLLQSNITFIFFSLNTQQIIQPLLTENTIQSNTFFFIILYLFKLIPPTFLYFFFEDPLFFSQLIRHSVFLLQLPLIHFSHPSLSLAKFASGFSSISQKTFSLMGNICVCIRPEETEQQKQRNQKNKKKNRTNPYAISQTQPAPIRVLKDIVPGVGPRISDKYVIGRELGRGEFGVTYLCTDRETKDRLACKSISKRKLRTAVDVEDVRREVAIMSTLPVHPNVVRLKAVYEDNEAVHLVMELCEGGELFDRIVARGHYSERAAAGVAKTIAEVVKMCHDNGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFRPGETFREIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGKLDFKREPWPQISESAKSLVKQMLEPDPKKRLTAQQVLEHPWIQNAKKAPNVPLGDIVRTRLKQFAGMNRFKKRALRVIAEHLSVEEVEVIRDMFALMDSDRDGKVTYEELKAGLRKVGSQLGEPEIKLLMDVADVDGNGYLDYGEFVAVTIHLQKMENDEHFHRAFMYFDKDESGYIELDELRDALNDESGETDDDVLNEIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLQDGISGQTVTV*

Click here to download the sequence:
Link to NCBI Protein BLAST