Transcript Information: S_Transcript_52998.p1


Annotated TAIR IDAT3G20410.1
Annotated Gene Namecalmodulin-domain protein kinase 9
Annotated Gene Symbol(s)CPK9
Annotation TypeOrtholog
Chromosome Positionchr3:7116388-7118824 | Forward length=541
E-Value9.4E-288
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.062876904256
Replicate 245.816372333456
Replicate 340.953215826762
Condition 2: 8 Hour
Replicate 158.515276608507
Replicate 251.434343601615
Replicate 354.743877774288
Condition 3: 24 Hour
Replicate 131.154478697801
Replicate 232.830755087232
Replicate 328.899277047357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52998.p1 GENE.S_Transcript_52998~~S_Transcript_52998.p1 ORF type:complete len:535 (+),score=136.03,Pkinase|PF00069.21|5.5e-76,EF-hand_1|PF00036.28|4.5e-07,EF-hand_1|PF00036.28|6.7e-05,EF-hand_1|PF00036.28|4e-07,EF-hand_1|PF00036.28|7.5e-08,Pkinase_Tyr|PF07714.13|3.9e-31,EF-hand_7|PF13499.2|2e-13,EF-hand_7|PF13499.2|1.4e-11,EF-hand_6|PF13405.2|9.2e-05,EF-hand_6|PF13405.2|0.13,EF-hand_6|PF13405.2|5.1e-07,EF-hand_6|PF13405.2|0.0019,EF-hand_8|PF13833.2|0.031,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|5.2e-11,EF-hand_5|PF13202.2|0.00017,EF-hand_5|PF13202.2|0.081,EF-hand_5|PF13202.2|3.4e-05,EF-hand_5|PF13202.2|0.014,SPARC_Ca_bdg|PF10591.5|0.18,SPARC_Ca_bdg|PF10591.5|0.0028,EF-hand_4|PF12763.3|0.49,EF-hand_4|PF12763.3|0.0011,Kinase-like|PF14531.2|80,Kinase-like|PF14531.2|0.00016,EF-hand_9|PF14658.2|2,EF-hand_9|PF14658.2|0.024 S_Transcript_52998:267-1871(+)
ATGGGAATTTGTGCGAGCAAAGGGAAAGGTACTAGTTCAGAAGCAAACCAGCATAACAACAATGGCTACAGTAGACCTGGAAATGGTGATCATCAATCCCAATCAAAACAACAAACCACACCTCAACAACAAAGGCCTGTGCCACCTCAACAACCAGCTTCACAGCAACCAGCTAGGGTTCCAAGCCCAAAACCAGGCCCAAGACCGGAGCCCAGCACCATCCTAGGCAAATCCTTTGAAGATGTAAGGATGCACTACACATTGGGTAGGGAACTGGGTAGAGGTCAATTTGGGGTTACATATCTTTGTACTGACAAAAAGAGTGGTCAACAATATGCTTGTAAGTCAATCTCAAAGAAGAAGTTAGTAACAAAGGCTGATAGAGAGGACATGAGAAGGGAGATTCAGATCATGCAACATATGAGTGGTCAGCCTAACATTGTGGAATTTAAGGGTGCTTATGAGGATAAGACTTCTGTGAATCTTGTTATGGAGTTGTGTGCTGGTGGTGAACTCTTTGATAGGATTATTGCTAAGGGACATTACAGTGAGAAAGCTGCTGCTAATATGTTAAGACAGATTGTGAATGTTGTTCATGTTTGTCACTTTATGGGTGTTATGCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTTCTAGTAAGGATGAAAATGCCCTCTTGAAGGCCACTGATTTTGGCCTTTCTGTCTTCATTGAGGAAGGCAAAGTATACCGCGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAGGTATTACGTCGTAGGTATGGGAAGGAGATTGATGTTTGGAGTGCTGGAGTCATGTTGTATATCTTACTCAGTGGTGTGCCTCCCTTCTGGGCAGAAACGGAGAAGGGGATTTTTGATGCTATCTTGCAAGGACACATTGACTTTGAAAGCAAACCTTGGCCTTCAATCTCACATGGTGCCAAGGACCTCGTGATGAAAATGCTTACACAGGATCCTAAGAAACGAATTACTGCTGCTCAAGTTCTCGAGCACCCATGGCTGAGAGAAGGTGAAGCATCAGACAAGCCAATAGATAGCGCTGTTCTCTCCAGGATGAAGCAGTTCAGAGTCATGAACAAGCTCAAGAAGCTGGCTCTGAAGGTCATTGCTGAAAACCTTCCTGAGGAAGAGATCCAAGGACTGAAGCAAATGTTTGCAAACATGGACACCGATGGTAGTGGGTCAATCACCTATGAAGAATTGAAGGAGGGATTGGCTCGTCTTGGATCAAAGCTTACTGAAACTGAAGTAAAGGCGCTCATGGAAGCTGCTGATCAAGATGGAAGTGGAACAATAGACTACTATGAGTTTATCACAGCAACAATGCATAGGTACAGGTTAGAAAGAGATGAGCATCTTTACAAGGCATTCCAATACTTCGACAAAGACAACAGCGGGTTTATCACCACAGATGAACTAGAAACAGCAATGAAGGAGTATGGAATTGCTGACGAGAATAGCATTACAGAGATTCTAGCAGAAGTCGACACTGATAATGATGGAAGAATCAACTACGATGAATTTTGCGCGATGATGAGAAGTGGGACTCAAAACCCCAATGCCAAACTTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52998.p1 GENE.S_Transcript_52998~~S_Transcript_52998.p1 ORF type:complete len:535 (+),score=136.03,Pkinase|PF00069.21|5.5e-76,EF-hand_1|PF00036.28|4.5e-07,EF-hand_1|PF00036.28|6.7e-05,EF-hand_1|PF00036.28|4e-07,EF-hand_1|PF00036.28|7.5e-08,Pkinase_Tyr|PF07714.13|3.9e-31,EF-hand_7|PF13499.2|2e-13,EF-hand_7|PF13499.2|1.4e-11,EF-hand_6|PF13405.2|9.2e-05,EF-hand_6|PF13405.2|0.13,EF-hand_6|PF13405.2|5.1e-07,EF-hand_6|PF13405.2|0.0019,EF-hand_8|PF13833.2|0.031,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|5.2e-11,EF-hand_5|PF13202.2|0.00017,EF-hand_5|PF13202.2|0.081,EF-hand_5|PF13202.2|3.4e-05,EF-hand_5|PF13202.2|0.014,SPARC_Ca_bdg|PF10591.5|0.18,SPARC_Ca_bdg|PF10591.5|0.0028,EF-hand_4|PF12763.3|0.49,EF-hand_4|PF12763.3|0.0011,Kinase-like|PF14531.2|80,Kinase-like|PF14531.2|0.00016,EF-hand_9|PF14658.2|2,EF-hand_9|PF14658.2|0.024 S_Transcript_52998:267-1871(+)
MGICASKGKGTSSEANQHNNNGYSRPGNGDHQSQSKQQTTPQQQRPVPPQQPASQQPARVPSPKPGPRPEPSTILGKSFEDVRMHYTLGRELGRGQFGVTYLCTDKKSGQQYACKSISKKKLVTKADREDMRREIQIMQHMSGQPNIVEFKGAYEDKTSVNLVMELCAGGELFDRIIAKGHYSEKAAANMLRQIVNVVHVCHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDVWSAGVMLYILLSGVPPFWAETEKGIFDAILQGHIDFESKPWPSISHGAKDLVMKMLTQDPKKRITAAQVLEHPWLREGEASDKPIDSAVLSRMKQFRVMNKLKKLALKVIAENLPEEEIQGLKQMFANMDTDGSGSITYEELKEGLARLGSKLTETEVKALMEAADQDGSGTIDYYEFITATMHRYRLERDEHLYKAFQYFDKDNSGFITTDELETAMKEYGIADENSITEILAEVDTDNDGRINYDEFCAMMRSGTQNPNAKLF*

Click here to download the sequence:
Link to NCBI Protein BLAST