Transcript Information: S_Transcript_53004.p1


Annotated TAIR IDAT1G42430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15891512-15894322 | Forward length=426
E-Value7.7E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1127.25661304918
Replicate 287.112998451299
Replicate 3108.68040906407
Condition 2: 8 Hour
Replicate 15.0774738850317
Replicate 25.4154078056481
Replicate 34.3139215391034
Condition 3: 24 Hour
Replicate 162.760697012659
Replicate 258.368308385117
Replicate 349.54330151005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53004.p1 GENE.S_Transcript_53004~~S_Transcript_53004.p1 ORF type:complete len:252 (+),score=64.62 S_Transcript_53004:1873-2628(+)
ATGGGTGGTCAGTGCCAAGATGGTTCCTCCGAATGGAAAGAAACGTGGTGGGAGAAAAGTGACTGGACTGGATATAAAGAACTAGGTGTGGAGAAGTCCGGAAGAAATGCTGAGGGAGATTCATGGTGGGAAACATGGCAAGAAATGCTACATCAAGATGAGTGGAGTAATATAGCAAGGATAGAGAGGAGTGCAGAAAAACAAGCTAAATCAGGTTCTGAAAATGCTGGTTGGTATGAAAAATGGTGGGAAAAATACGATGCCAAAGGATGGACAGAGAAAGGGGCACACAAATATGGCCGGTTGAATGAACAGTCATGGTGGGAGAAGTGGGGAGAGCACTACGATGGAAGAGGATCTGTTTTGAAATGGACAGATAAGTGGGCTGAGACTGAACTGGGAACTAAATGGGGAGACAAATGGGAGGAGAAATTTTTTGCTGGCATTGGTTCACGCCAAGGAGAAACTTGGCACGTGTCCCCCAGTGGCGAACGTTGGTCCAGGACATGGGGAGAAGAACATTTTGGAAATGGAAAGGTACACAAGTATGGCAAGAGCACAACAGGAGAAAGCTGGGATATAGTCATGGATGAGGGAACATATTACGAGGCTGAACCTCACTACGGATGGGCGGATGTTGTTGGTGATTCAACACAACTACTATCAATCGAACCACGGGAGAGACCGCCTGGTGTCTTTCCAAATCCTCCACCACCTCCTCTTGATGGTGGTTCTGATTTGCCACCTTCCTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53004.p1 GENE.S_Transcript_53004~~S_Transcript_53004.p1 ORF type:complete len:252 (+),score=64.62 S_Transcript_53004:1873-2628(+)
MGGQCQDGSSEWKETWWEKSDWTGYKELGVEKSGRNAEGDSWWETWQEMLHQDEWSNIARIERSAEKQAKSGSENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQSWWEKWGEHYDGRGSVLKWTDKWAETELGTKWGDKWEEKFFAGIGSRQGETWHVSPSGERWSRTWGEEHFGNGKVHKYGKSTTGESWDIVMDEGTYYEAEPHYGWADVVGDSTQLLSIEPRERPPGVFPNPPPPPLDGGSDLPPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST