Transcript Information: S_Transcript_53005.p1


Annotated TAIR IDAT1G42430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15891512-15894322 | Forward length=426
E-Value7.5E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1466576456889
Replicate 29.1274992331851
Replicate 311.234153959554
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.5524282683671
Replicate 22.070805118651
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53005.p1 GENE.S_Transcript_53005~~S_Transcript_53005.p1 ORF type:3prime_partial len:394 (+),score=62.92 S_Transcript_53005:315-1493(+)
ATGACGGCGAGTTCGTCAGGTGGATTTACGACGCCATTTCTAAGCTTCAAGCTACGGAAACTCAACGACGAAGTCTCGTTCCTTCGCTTCCGTCACCGGAGCCGTTTCGAACTCCTCACCGGCGGTAAGAAACGACGTCGTTTTCGGTACTCCGGTGAGGTGAGAGGCGACGAAGACGATGATAAAGAGGAGGAGAGAGAAAGAATCGGATGTTGCTGCTCGTGCTCTTCTTCGTCAGATTCGAAGAAGACGAATTCTGATAAGTACGAATTGGAATGGCGAAGATTATCAACTAGGTTCGATCTGAACAAGATTGCTCGTAGTGTCCGTAGCCAAGCCTTGCCTTCTTTGCCTTTCGCTTCTCGTCAACTTCGCTTTCCATCTAAACCCCGCTGCACTCCTCGTAATCCTGGTCCACAATCCCATGACACACCGCCCAAGAGAGACACGGGTATTGCAAATGAGGAAGATTGGGGAATCAGCTTGTTAAATGAAAACGTGAATGAATCGGGTATCAACGAAGATGGCAGTACATGGTATCGTGAAAGTGGGGAGGAGCTTGGGGAAAATGGGTACAGATGTCGTTGGACGAGGATGGGTGGTCAGTGCCAAGATGGTTCCTCCGAATGGAAAGAAACGTGGTGGGAGAAAAGTGACTGGACTGGATATAAAGAACTAGGTGTGGAGAAGTCCGGAAGAAATGCTGAGGGAGATTCATGGTGGGAAACATGGCAAGAAATGCTACATCAAGATGAGTGGAGTAATATAGCAAGGATAGAGAGGAGTGCAGAAAAACAAGCTAAATCAGGTTCTGAAAATGCTGGTTGGTATGAAAAATGGTGGGAAAAATACGATGCCAAAGGATGGACAGAGAAAGGGGCACACAAATATGGCCGGTTGAATGAACAGTCATGGTGGGAGAAGTGGGGAGAGCACTACGATGGAAGAGGATCTGTTTTGAAATGGACAGATAAGTGGGCTGAGACTGAACTGGGAACTAAATGGGGAGACAAATGGGAGGAGAAATTTTTTGCTGGCATTGGTTCACGCCAAGGAGAAACTTGGCACGTGTCCCCCAGTGGCGAACGTTGGTCCAGGACATGGGGAGAAGAACATTTTGGAAATGGAAAGGTACACAAGTATGGCAAGAGCACAACAGGAGAAAGCTGGGATATAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53005.p1 GENE.S_Transcript_53005~~S_Transcript_53005.p1 ORF type:3prime_partial len:394 (+),score=62.92 S_Transcript_53005:315-1493(+)
MTASSSGGFTTPFLSFKLRKLNDEVSFLRFRHRSRFELLTGGKKRRRFRYSGEVRGDEDDDKEEERERIGCCCSCSSSSDSKKTNSDKYELEWRRLSTRFDLNKIARSVRSQALPSLPFASRQLRFPSKPRCTPRNPGPQSHDTPPKRDTGIANEEDWGISLLNENVNESGINEDGSTWYRESGEELGENGYRCRWTRMGGQCQDGSSEWKETWWEKSDWTGYKELGVEKSGRNAEGDSWWETWQEMLHQDEWSNIARIERSAEKQAKSGSENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQSWWEKWGEHYDGRGSVLKWTDKWAETELGTKWGDKWEEKFFAGIGSRQGETWHVSPSGERWSRTWGEEHFGNGKVHKYGKSTTGESWDIV

Click here to download the sequence:
Link to NCBI Protein BLAST