Transcript Information: S_Transcript_53006.p1


Annotated TAIR IDAT1G42430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15891512-15894322 | Forward length=426
E-Value1.1E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.184683329795
Replicate 248.188132432986
Replicate 364.62794485953
Condition 2: 8 Hour
Replicate 13.8059478469671
Replicate 24.8799783151812
Replicate 32.7777025207624
Condition 3: 24 Hour
Replicate 143.937301071733
Replicate 238.843076497706
Replicate 336.93993472364


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53006.p1 GENE.S_Transcript_53006~~S_Transcript_53006.p1 ORF type:3prime_partial len:353 (+),score=54.25 S_Transcript_53006:315-1370(+)
ATGACGGCGAGTTCGTCAGGTGGATTTACGACGCCATTTCTAAGCTTCAAGCTACGGAAACTCAACGACGAAGTCTCGTTCCTTCGCTTCCGTCACCGGAGCCGTTTCGAACTCCTCACCGGCGGTAAGAAACGACGTCGTTTTCGGTACTCCGGTGAGGTGAGAGGCGACGAAGACGATGATAAAGAGGAGGAGAGAGAAAGAATCGGATGTTGCTGCTCGTGCTCTTCTTCGTCAGATTCGAAGAAGACGAATTCTGATAAGTACGAATTGGAATGGCGAAGATTATCAACTAGGTTCGATCTGAACAAGATTGCTCGTAGTGTCCGTAGCCAAGCCTTGCCTTCTTTGCCTTTCGCTTCTCGTCAACTTCGCTTTCCATCTAAACCCCGCTGCACTCCTCGTAATCCTGGTCCACAATCCCATGACACACCGCCCAAGAGAGACACGGGTATTGCAAATGAGGAAGATTGGGGAATCAGCTTGTTAAATGAAAACGTGAATGAATCGGGTATCAACGAAGATGGCAGTACATGGTATCGTGAAAGTGGGGAGGAGCTTGGGGAAAATGGGTACAGATGTCGTTGGACGAGGATGGGTGGTCAGTGCCAAGATGGTTCCTCCGAATGGAAAGAAACGTGGTGGGAGAAAAGTGACTGGACTGGATATAAAGAACTAGGTGTGGAGAAGTCCGGAAGAAATGCTGAGGGAGATTCATGGTGGGAAACATGGCAAGAAATGCTACATCAAGATGAGTGGAGTAATATAGCAAGGATAGAGAGGAGTGCAGAAAAACAAGCTAAATCAGGTTCTGAAAATGCTGGTTGGTATGAAAAATGGTGGGAAAAATACGATGCCAAAGGATGGACAGAGAAAGGGGCACACAAATATGGCCGGTTGAATGAACAGTCATGGTGGGAGAAGTGGGGAGAGCACTACGATGGAAGAGGATCTGTTTTGAAATGGTTGGTCCAGGACATGGGGAGAAGAACATTTTGGAAATGGAAAGGTACACAAGTATGGCAAGAGCACAACAGGAGAAAGCTGGGATATAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53006.p1 GENE.S_Transcript_53006~~S_Transcript_53006.p1 ORF type:3prime_partial len:353 (+),score=54.25 S_Transcript_53006:315-1370(+)
MTASSSGGFTTPFLSFKLRKLNDEVSFLRFRHRSRFELLTGGKKRRRFRYSGEVRGDEDDDKEEERERIGCCCSCSSSSDSKKTNSDKYELEWRRLSTRFDLNKIARSVRSQALPSLPFASRQLRFPSKPRCTPRNPGPQSHDTPPKRDTGIANEEDWGISLLNENVNESGINEDGSTWYRESGEELGENGYRCRWTRMGGQCQDGSSEWKETWWEKSDWTGYKELGVEKSGRNAEGDSWWETWQEMLHQDEWSNIARIERSAEKQAKSGSENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQSWWEKWGEHYDGRGSVLKWLVQDMGRRTFWKWKGTQVWQEHNRRKLGYS

Click here to download the sequence:
Link to NCBI Protein BLAST