Transcript Information: S_Transcript_53012.p1


Annotated TAIR IDAT1G42430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55760.3); Has 186 Blast hits to 143 proteins in 47 species: Archae - 0; Bacteria - 23; Metazoa - 14; Fungi - 6; Plants - 87; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:15891512-15894322 | Forward length=426
E-Value1.2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.952117225149
Replicate 213.298119733297
Replicate 314.653132778751
Condition 2: 8 Hour
Replicate 12.1909647586095
Replicate 20.45969551999438
Replicate 32.335983299176
Condition 3: 24 Hour
Replicate 114.064514028191
Replicate 215.057463855519
Replicate 315.893343049799


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53012.p1 GENE.S_Transcript_53012~~S_Transcript_53012.p1 ORF type:complete len:146 (+),score=22.74 S_Transcript_53012:3560-3997(+)
ATGTCCATTTATTCTTATTCTTCTGAGTGTTGGTGGAAGGCTGATGAATTTGCTCTATTTTTTTGGTACACAGGTTGGTCCAGGACATGGGGAGAAGAACATTTTGGAAATGGGTATGTAGCTTTGATTGAAAAATGTGTGCTAAGTTTTGGTATAGATGACGCGATAATGCAATTATGCAAAATCTTTTGTGTTTTATGTTGTTCGCCCATCAGAAAGGTACACAAGTATGGCAAGAGCACAACAGGAGAAAGCTGGGATATAGTCGTGGATGAGGGAACATCTTACGAGGCTGAACCTCACTATGGATGGGCGGACGTTGTTGGTGATTCAACACAACTACTATCAATCGAACCACGGGAGAGACCGCCTGGTGTCTTTCCAAATCCTCCACCACCTCCTCTTGATGGTGGTTCTGACTTGCCACCTTCCTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53012.p1 GENE.S_Transcript_53012~~S_Transcript_53012.p1 ORF type:complete len:146 (+),score=22.74 S_Transcript_53012:3560-3997(+)
MSIYSYSSECWWKADEFALFFWYTGWSRTWGEEHFGNGYVALIEKCVLSFGIDDAIMQLCKIFCVLCCSPIRKVHKYGKSTTGESWDIVVDEGTSYEAEPHYGWADVVGDSTQLLSIEPRERPPGVFPNPPPPPLDGGSDLPPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST