Transcript Information: S_Transcript_53020.p1


Annotated TAIR IDAT5G63480.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25417317-25418473 | Forward length=189
E-Value7E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23141740204505
Replicate 20.28777551596758
Replicate 30.2405574271774
Condition 2: 8 Hour
Replicate 10
Replicate 20.48634453564623
Replicate 30.18535519656506
Condition 3: 24 Hour
Replicate 10.47488877153466
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53020.p1 GENE.S_Transcript_53020~~S_Transcript_53020.p1 ORF type:complete len:230 (+),score=54.97 S_Transcript_53020:1490-2179(+)
ATGGGCTTGGAGCCTCAACAACAACCACAAAGTTTTCTTAGGTCAGATTTCAGTGAATTTGATTGCCCTCTTTCTTTCTCAAAAGTTAAGAGGAGCACATCGATGGAAGACCAAGGAACAGGTATTGATGACCCCAAATCAATAAAGGAGCTAGCAGCAGATGGTCAGAAACATCTAGAAGAGACAGTTGATGCAGCATTTCATATCCTTTCTGCAATGAATGATGAACTTTGCGATCCAGCTTTGTGGTCGACCTCTACTGTATCTGGCTCTGCTAACCCTGATGATAATAATAGTAATTCAAGTATTATCGCTGCTCATGGACATAATGAAGCAGTAAATGGGAACATGTCATTGGATTCAAACCAACATTTTGATATGGGTGGTGGTGCTCTTGATGAAGCTCGCCTTCGTTATAAGTCTTCTATAGCTTCTCTCCGTGCTGTTCTTAATGCCATTTCTGATTCCCAGAAGGAAATGGTGAGCAGCTCCACATCACAGGCAGATCAGTCTGACATTGAGAAGTTAGAGGAGCAAGCGTCAAACTTAAGAATGGTAATACCAAAGTCTAAGGTTATAATGAACTCCTTGTTCACGGGCAAAGCCAGTAGCTTAGTCTTTAGATATTTGATGCAGTTTGATCAGACTAGTTTTGTGTTTTCGATGGCGTCATTGTCATCTTGTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53020.p1 GENE.S_Transcript_53020~~S_Transcript_53020.p1 ORF type:complete len:230 (+),score=54.97 S_Transcript_53020:1490-2179(+)
MGLEPQQQPQSFLRSDFSEFDCPLSFSKVKRSTSMEDQGTGIDDPKSIKELAADGQKHLEETVDAAFHILSAMNDELCDPALWSTSTVSGSANPDDNNSNSSIIAAHGHNEAVNGNMSLDSNQHFDMGGGALDEARLRYKSSIASLRAVLNAISDSQKEMVSSSTSQADQSDIEKLEEQASNLRMVIPKSKVIMNSLFTGKASSLVFRYLMQFDQTSFVFSMASLSSCV*

Click here to download the sequence:
Link to NCBI Protein BLAST