Transcript Information: S_Transcript_530459.p2


Annotated TAIR IDAT3G09540.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2929079-2931137 | Reverse length=378
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98566671241409
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_530459.p2 GENE.S_Transcript_530459~~S_Transcript_530459.p2 ORF type:internal len:108 (+),score=-0.74,Pec_lyase_C|PF00544.15|3.4e-18 S_Transcript_530459:2-322(+)
GTCGTCAAGGGCTCCATCTCCGGCAACGCCAAGGTCCGAGTTGCCTCCGACAAGACCATCGTGGGCCAGAAGGGCTCCAAGGTTGTCGGCGCCGGTCTCTACATCAAGGGCGTCAAGAACGTTATCGTTCGCAACCTTGCCATCTCTAAGGTCAAGGAGGCCTACGGCGACGCTATTGGTATCGAGGCTTCTACCAACGTTTGGGTTGATCACTGCGACCTGTCCTCGGACCAAAGCTCTGGAAAGGACTACTACGATGGTCTCTTGGATATTACCAAGGGCGCTGACTGGATCACGATCTCGAACACCTACCTCCACGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_530459.p2 GENE.S_Transcript_530459~~S_Transcript_530459.p2 ORF type:internal len:108 (+),score=-0.74,Pec_lyase_C|PF00544.15|3.4e-18 S_Transcript_530459:2-322(+)
VVKGSISGNAKVRVASDKTIVGQKGSKVVGAGLYIKGVKNVIVRNLAISKVKEAYGDAIGIEASTNVWVDHCDLSSDQSSGKDYYDGLLDITKGADWITISNTYLHD

Click here to download the sequence:
Link to NCBI Protein BLAST