Transcript Information: S_Transcript_5310.p1


Annotated TAIR IDAT2G26790.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11425270-11427669 | Reverse length=799
E-Value1.6E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4626452499629
Replicate 24.8068256318698
Replicate 34.9887939712065
Condition 2: 8 Hour
Replicate 17.6479061969645
Replicate 27.2290918493119
Replicate 36.600868352583
Condition 3: 24 Hour
Replicate 14.0641643703431
Replicate 24.0223410998413
Replicate 33.2723827502354


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5310.p1 GENE.S_Transcript_5310~~S_Transcript_5310.p1 ORF type:complete len:817 (+),score=160.81,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|4.1e-15,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|8.1e-05,PPR_2|PF13041.2|21,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|8e-17,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|2.3e-11,PPR_1|PF12854.3|6.9e+03,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.2e-06,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|3.1,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.4e-11,PPR_1|PF12854.3|3.8e-11,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|6.6e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.046,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0016,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|0.0023,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00061,PPR|PF01535.16|6.7e-09,PPR|PF01535.16|44,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|2.8e-08,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0058,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00043,MRP-S27|PF10037.5|0.015,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|4.8e+02,MRP-S27|PF10037.5|0.081,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|43,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|35,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|2.7e+02,TPR_19|PF14559.2|3e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|14,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|20,TPR_19|PF14559.2|2.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+04,RPM2|PF08579.7|7.6e+02,RPM2|PF08579.7|0.09,RPM2|PF08579.7|4.1e+03,RPM2|PF08579.7|2.3e+02,RPM2|PF08579.7|34,RPM2|PF08579.7|1.5e+03 S_Transcript_5310:251-2701(+)
ATGTGGGTTTCTGCCATAAGGTTTTTGTCTCCTAGAAAATTTTGTTGCAACAATCGCTTCATCCATCAAAGATCGGTTTCTGCACTTGCTGAGTTGAGTTCTATCTTCACTGATTCAAGTTCTGATGAGCAAACAAATTGTTCGAGCCCTAACAGTAGTGAATTGGTGGATACTTTCCTTGAGTTGGACACCAAAAGGGTTGTTGATGTCCTACAGGATTTGAGAAGAGATCCGAATAAGGCTAATTCCTTTTTTCTCCGGCTAAAAGAGTGTGGGTTTCGGCATAATGTTGACACATATGTGTGGATTATTAGAATACTCTGTAGTTGGCGGTCTGATAGGAGGTTGGACTCTTTGTTATTGGATGTTATTAAGTCAGATAAGGATGAATTGGGTTTTGACATGTCCGAGTTGCTTGAAGCTCTTTGTGAAAGACTTGAGGTTGAAGGAACCAGTTCATTGGTTAGAGTCTTTGATGTTTTGGTGAAGGTTTATGTTACTTTGGGCATGTTCGATGAGTCTATCGATACCTTGTTTCAGATACGAAGGCAGGGTTTTGTGCCTAGTATTTTAACATGTAATTTTATAATCAACCGTTTGATAGAGCACGGGAAGCTGGACATGGCTGTGGCTGTCTATCAACAATTAAAGAGGATGGGTTTGAACCCTAATGTATATACATATAATCTTGTCATGAAGGCATTTTGCAGGAAGGGAAGTTTAGAGGAGGCTTTCGATGTATTGAGGGAGATGGAAGAGGCTGGTTTACACCCTAATGAGTATTCTTACACCACATGTCTTGAAGGGCTTTGTTCACATCAAAAGACCACAGAGGCATATGAGGTGCTTAAATTATGGAGGTCTTCTGATGTCCCCTTTGATGATTATGCTTATGATATAGTGATTCGTGGATTTTGCAATGAGATGAAGTTAAGTGAAGCTGAGGGTGTGTTATATGACATTGAGAACCAAGGGTTGTCCCCCAATGTGTATTCTTTTGGTGCTTTAATTCATGCATATTGCAAAACTGGAAATTTTTCAAAAGCAAGGTGTCTTGAAAGTTATATGCCATCAAAAGGCTTGAAAATGAATTGTATGGTTGCAAGTTCCATTCTTCAGTGCTTGTGTTCTATGGGGTCATTCACAGAGGTTCTTGAGCAATTCAGAACATACAATGACAGTGGCATTTTTCTTGATGAAGTTTGTTATAACATTGTGGTAAATGCTTTGTGTAAGTTAGGCAAGGTGGAAGAAGCTGTGAAACTCCTTGAAGAGATGAAGAAAAGAAACCTGGACCCAGATTTGATCAATTACTCAACTTTGATAAATGGGTATTGTCTCGAGGGAAAACTTATTGACGCCTGGAATGTATTTGAGCAAATGAAAGGTAAGGGTTTGGAGCCTGATATCATTTCATATAATATACTTCTTGGTGGTTTTGCTAGAATGGGTCTTGTAAAAGAGATATTAAACCTTCTTGAGTACATGAGGTCCCAAGGTTTGGCACCTAATGTTCTCACACACAGCAAAATCATTGAAGGTCTTTGTGTAGGTGGTAATGCTAAGGAAGCCGAAATGTATCTGAACAGCTTAGAAGAGAAGTGTCCTGATAACTATTCTGCTATGATTAAGGGATACTGTGAAGCAAGGCTTGCATCAGAGGCCTTCCAACTATTCATCAATCTTTATAAGCAAGGGATTTTAGTGAAGAAGCACACAGGCCTTTTGTTACTAAGTAGCTTATGCATAGAAGGTGAAATTGATAGTGCCTTAATGCTGTTTAAAACATTACTAGATTCAAAAGATCATCCTTGCATAATAATGTACTCAAAGCTCATGGCGGCTTTGTGTAAGGCTGGAGATATAACTAAGGCACGCTGGGTGTTTGATGACTGGATCAGAAAAGGATCAACACCTGATGCCATCATGTACACAATAATGCTAAACGGGTACTGCAAAGCAAATTCTCTAACGAAGGCCCTTGAACTTTTTAAAGATATGAAGGGTAGAGGCATCATCCCTGATGTTGTCACTTACACGGTTTTGCTTGACGGCCATTCGAAGTTCAGTTTGACAAAGTCCCATTCTTGTTCAGACAATTTTGATAAAAAGGAAGATGCAATGGTTGAAGCAGCTATTAGGAGTGAGATGCTACAAAGAGATGTAAAACCTGATGTTGTCTGTTACACTGCTTTGATTGACAAATATTGTAAGCTGGATGATGTCGAGGATGCCATTAAGCTGTTCCATGAAATGATAGATAATGGTCTACAACCTGATATTGTGACATACACAGCTCTTCTTTCTGGCTTTTGCAGAGTTGGGGACGTGGATAGAGCTGTGACAGTAGTTGATGCCTTGTCGTCACAGGGTCTAGAACCTGACGAGATAACCATGTCAGTGTTGGAACATGGTATATTGAAGGCCAAAAAAGTGTGTTTAAGGACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5310.p1 GENE.S_Transcript_5310~~S_Transcript_5310.p1 ORF type:complete len:817 (+),score=160.81,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|4.3e-14,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|3.4e-06,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|6e-17,PPR_2|PF13041.2|4.1e-15,PPR_2|PF13041.2|1.5e-11,PPR_2|PF13041.2|8.1e-05,PPR_2|PF13041.2|21,PPR_2|PF13041.2|2.8e-11,PPR_2|PF13041.2|8e-17,PPR_2|PF13041.2|1.1e-19,PPR_2|PF13041.2|2.3e-11,PPR_1|PF12854.3|6.9e+03,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|1.1e-11,PPR_1|PF12854.3|0.00079,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|6.3e+03,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|7.2e-06,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|3.1,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|9.4e-11,PPR_1|PF12854.3|3.8e-11,PPR_1|PF12854.3|1.4e+03,PPR|PF01535.16|6.6e+02,PPR|PF01535.16|14,PPR|PF01535.16|0.046,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0016,PPR|PF01535.16|1e+02,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|2.9e-07,PPR|PF01535.16|8.9e-05,PPR|PF01535.16|4.4,PPR|PF01535.16|0.0023,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00061,PPR|PF01535.16|6.7e-09,PPR|PF01535.16|44,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.00024,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9e+02,PPR_3|PF13812.2|2.8e-08,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|3.5e+02,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|3.8e-06,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0058,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|0.00043,MRP-S27|PF10037.5|0.015,MRP-S27|PF10037.5|5.2e+02,MRP-S27|PF10037.5|1.2,MRP-S27|PF10037.5|8.5,MRP-S27|PF10037.5|4.8e+02,MRP-S27|PF10037.5|0.081,TPR_14|PF13428.2|2.6e+02,TPR_14|PF13428.2|1.5e+04,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|1e+02,TPR_14|PF13428.2|43,TPR_14|PF13428.2|9e+03,TPR_14|PF13428.2|35,TPR_14|PF13428.2|1.6e+02,TPR_14|PF13428.2|2.7e+02,TPR_19|PF14559.2|3e+02,TPR_19|PF14559.2|1.6e+02,TPR_19|PF14559.2|3.2e+02,TPR_19|PF14559.2|14,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|20,TPR_19|PF14559.2|2.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|1.6e+04,RPM2|PF08579.7|7.6e+02,RPM2|PF08579.7|0.09,RPM2|PF08579.7|4.1e+03,RPM2|PF08579.7|2.3e+02,RPM2|PF08579.7|34,RPM2|PF08579.7|1.5e+03 S_Transcript_5310:251-2701(+)
MWVSAIRFLSPRKFCCNNRFIHQRSVSALAELSSIFTDSSSDEQTNCSSPNSSELVDTFLELDTKRVVDVLQDLRRDPNKANSFFLRLKECGFRHNVDTYVWIIRILCSWRSDRRLDSLLLDVIKSDKDELGFDMSELLEALCERLEVEGTSSLVRVFDVLVKVYVTLGMFDESIDTLFQIRRQGFVPSILTCNFIINRLIEHGKLDMAVAVYQQLKRMGLNPNVYTYNLVMKAFCRKGSLEEAFDVLREMEEAGLHPNEYSYTTCLEGLCSHQKTTEAYEVLKLWRSSDVPFDDYAYDIVIRGFCNEMKLSEAEGVLYDIENQGLSPNVYSFGALIHAYCKTGNFSKARCLESYMPSKGLKMNCMVASSILQCLCSMGSFTEVLEQFRTYNDSGIFLDEVCYNIVVNALCKLGKVEEAVKLLEEMKKRNLDPDLINYSTLINGYCLEGKLIDAWNVFEQMKGKGLEPDIISYNILLGGFARMGLVKEILNLLEYMRSQGLAPNVLTHSKIIEGLCVGGNAKEAEMYLNSLEEKCPDNYSAMIKGYCEARLASEAFQLFINLYKQGILVKKHTGLLLLSSLCIEGEIDSALMLFKTLLDSKDHPCIIMYSKLMAALCKAGDITKARWVFDDWIRKGSTPDAIMYTIMLNGYCKANSLTKALELFKDMKGRGIIPDVVTYTVLLDGHSKFSLTKSHSCSDNFDKKEDAMVEAAIRSEMLQRDVKPDVVCYTALIDKYCKLDDVEDAIKLFHEMIDNGLQPDIVTYTALLSGFCRVGDVDRAVTVVDALSSQGLEPDEITMSVLEHGILKAKKVCLRT*

Click here to download the sequence:
Link to NCBI Protein BLAST