Transcript Information: S_Transcript_53119.p1


Annotated TAIR IDAT1G04680.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1304052-1307780 | Reverse length=431
E-Value6.3E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.650055983709
Replicate 215.982493222767
Replicate 312.924437097956
Condition 2: 8 Hour
Replicate 134.758707052335
Replicate 234.174319969346
Replicate 334.910994502647
Condition 3: 24 Hour
Replicate 15.848236525041
Replicate 26.9597531612405
Replicate 38.3411485434242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53119.p1 GENE.S_Transcript_53119~~S_Transcript_53119.p1 ORF type:5prime_partial len:127 (+),score=17.10 S_Transcript_53119:3-383(+)
CTCATCCAGAGAATGCCAAGGTGTCGACATGGTTATTTCCACGTCGTGAACAATGACTACACCCACTGGGAAATGTATGCCATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGGAATAGATACCTTGCCCCTGCAAACCCTTTTGCAAAGGAGGTCACAAAGCGAGTAGACACAGGTGCAGGTCAGTGGAAGGGTTGGAATTGGAGGTCGGAGGGGGACCTTATGCTCAACGGTGCCTACTTCACCCCGTCTGGTGCTGGAGCCTCAGCTAGCTATGCTCGTGCCTCAAGTTTGGGTGCTAAGTCGTCTTCCATGGTTGGAGCAATCACTGCTAGTGCCGGTCCTCTATCCTGTCGTAGGGGCCGCCAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53119.p1 GENE.S_Transcript_53119~~S_Transcript_53119.p1 ORF type:5prime_partial len:127 (+),score=17.10 S_Transcript_53119:3-383(+)
LIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPANPFAKEVTKRVDTGAGQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMVGAITASAGPLSCRRGRQC*

Click here to download the sequence:
Link to NCBI Protein BLAST