Transcript Information: S_Transcript_5314.p1


Annotated TAIR IDAT3G06620.1
Annotated Gene NamePAS domain-containing protein tyrosine kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2062833-2067138 | Reverse length=773
E-Value1.6e-322
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.551569800461
Replicate 215.201973708017
Replicate 317.371867536811
Condition 2: 8 Hour
Replicate 117.720711437721
Replicate 217.37787468531
Replicate 318.152850863597
Condition 3: 24 Hour
Replicate 115.643755273909
Replicate 213.627530573649
Replicate 314.417246027699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5314.p1 GENE.S_Transcript_5314~~S_Transcript_5314.p1 ORF type:5prime_partial len:775 (+),score=145.15,Pkinase_Tyr|PF07714.13|1e-69,Pkinase|PF00069.21|1.2e-59,PAS|PF00989.20|6e-14,PAS_9|PF13426.2|2.7e-13,PAS_4|PF08448.6|1.9e-11,PAS_3|PF08447.7|2.3e-06,PAS_3|PF08447.7|4e+03,PAS_8|PF13188.2|1.3e-06 S_Transcript_5314:2-2326(+)
GTTTTTCCTTTTTTTTTTTTTTTGGGGATGGGCAGTCCATCACCACCACCAGCAGAAGAACTGCTGAAGAAGATCCAGGAGCTGGAAGCGGGCCATGCCCATCTCCAGGAGGAGATGACCCGGCTCATGGTTTCAGGCCGACCCAAGCCCAGGCCCGAGAGGAGGTCCCACTCCGTTTCCCCCCAGCGCCACAGGATCCCTCCCCCCAGGCCCGGAGGCGGGCCCGACAGTGGCTACAAGAAGGGGCTGTCCTTCGGGCATTCGTCCCCCCTGCAGAGGGAGAGCCGGTCCCACGAAGACCCGAAGAAGGTCCCGGGCCGGGCCCCCAGCCCGGTCCATAGAGGCCCGGCTGCCGTGAACTTCACGGACAGGCAGTACTTGAACATACTGCAGTCGATGGGGCAGGCCGTTCATATATATGACCTTGATCGCCGGCTTATTTATTGGAACCGATCTGCTGAAAGCCTTTATGGTTATTCTGCAGCAGAAGCTCTTGGCCAGAGTGTTCTTGAACTGCTGGTTGATCTTCAGGATTATGCTGCGGCTGATGATATTATCAGTCGTGTAAAAATGGGAGAGAAGTGGACAGGGCAGTTCCCTGTGAAAAATAAAATGGGAAGGAGGCTTTTAGTTATTGTAACCCTCACCCCATTCTATGATGATGATGATACTGTTGTTGGGATTATTTGTGTGTCGAGTGATACAAGACCATTTCAAGAAATGAAAGCGTCAATATCAGAAACACGGGAGCTCGAGGCGGCTCAAAGTCATAACCAGCCCAGAAGCACTGTCGCATCCAAACTTGGCCTTGATCCTGAGCAGCCTTTGCAGACCGCTATTACTTCAAAATTAACAAACTTGGCTACAAAGGTGGGCAACAAAGTTCGGTCTAAAATGAAGACTGCAGATAATAATGTATTTGGAGAAGGTGGGAGTGGAGATAGTCGACACTCTGATCATGGTTATTCTGATGCTGTGTTCTCAGACCATAAAGAGGATGGAAATTCCAGTGGTGCAAGTACTCCTAGAGGAGGAGGAGATGCAGTTGGTTCTGCTTTTGGTGTGTTTTCTCAGCTAACTGCAGGCAAATCCCCTGCCAAAGTGCAGGGAGAATCAGGTGATGAAAATGAAGGAAAAACTGCACTTCACAAGATGACGTCCAAAGCTGAGGCTTGGATTGGAAAAAAAGCAATGCAATGGTCATGGAAAGGGAATGAGCATCAAACCTCCGATTTTAGGAACACTCGATTTGGTTGGTCATGGCCACACAGTGATCAGGACTCCGATCGTCTGAATCCTGCTGTAAAATCAGAGAGCCAAACAGGAGAATTTCATCGGCCTTCTGTAAATGAGACTTCTGGATCCTGGTCATCATTCAACGTTAACAGCACAAGCAGTGCAAGTAGTTGCGGAAGCGCAAGCAGTGCTGTAAATAAGTTGGACATAGAAACTGATTGCTTAGACTATGAAATCTTGTGGGAAGACCTAACAATTGGAGAGCAAATTGGACAGGGTTCCTGTGGAACTGTGTACCATGGTCTCTGGTATGGATCGGATGTTGCTATTAAAGTTTTCTCCAAGCAAGAATATTCCGAGGATGCACTACTTTCATTCAGGCAGGAGGTTTCACTCATGAAGCGGCTTCGGCACCCTAACATTCTGCTATTTATGGGTGCGGTAACTTCACCTCAGCGTCTCTGCATTGTTACAGAGTTTCTTCCACGAGGAAGCTTGTTCCGTTTATTACAAAGGAGTACGTCCAAACTAGATTGGAGACGGCGAATTCACATGGCATTAGATATAGCACGAGGGATGAACTATCTCCATAACTGCAGCCCTCCTATCATACACCGTGATTTGAAATCTTCCAATCTTCTGGTTGATAAGAATTGGACAGTGAAGGTTGCAGATTTTGGCCTTTCACGTGTAAAACATGAGACTTATCTGACTACAAAGACTGGAAAAGGAACACCTCAATGGATGGCTCCAGAGGTGCTTCGGAATGAGCCCTCAGATGAAAAATCTGATATATACAGCTTTGGGGTGACACTTTGGGAACTTGCTACCCAAAAGATACCTTGGGAACATCTCAACTCAATGCAGGTGATCGGAGCAGTTGGGTTCATGAATCAAAGGTTAGATATGCCGAAGGATGTTGATCCAAGATGGGCTTCCATAATTGAGAGCTGCTGGCAAAGTGATCCTCAAAGCCGCCCAACATTCCAGGAATTGTTAGAAAAACTCAAGGATTTTCAGAGACAATATGCAATCCAGTTCCAAGCAGCCCGAGTTGCCTCTGCAGATGGTGCCCAGAAAGAACTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5314.p1 GENE.S_Transcript_5314~~S_Transcript_5314.p1 ORF type:5prime_partial len:775 (+),score=145.15,Pkinase_Tyr|PF07714.13|1e-69,Pkinase|PF00069.21|1.2e-59,PAS|PF00989.20|6e-14,PAS_9|PF13426.2|2.7e-13,PAS_4|PF08448.6|1.9e-11,PAS_3|PF08447.7|2.3e-06,PAS_3|PF08447.7|4e+03,PAS_8|PF13188.2|1.3e-06 S_Transcript_5314:2-2326(+)
VFPFFFFLGMGSPSPPPAEELLKKIQELEAGHAHLQEEMTRLMVSGRPKPRPERRSHSVSPQRHRIPPPRPGGGPDSGYKKGLSFGHSSPLQRESRSHEDPKKVPGRAPSPVHRGPAAVNFTDRQYLNILQSMGQAVHIYDLDRRLIYWNRSAESLYGYSAAEALGQSVLELLVDLQDYAAADDIISRVKMGEKWTGQFPVKNKMGRRLLVIVTLTPFYDDDDTVVGIICVSSDTRPFQEMKASISETRELEAAQSHNQPRSTVASKLGLDPEQPLQTAITSKLTNLATKVGNKVRSKMKTADNNVFGEGGSGDSRHSDHGYSDAVFSDHKEDGNSSGASTPRGGGDAVGSAFGVFSQLTAGKSPAKVQGESGDENEGKTALHKMTSKAEAWIGKKAMQWSWKGNEHQTSDFRNTRFGWSWPHSDQDSDRLNPAVKSESQTGEFHRPSVNETSGSWSSFNVNSTSSASSCGSASSAVNKLDIETDCLDYEILWEDLTIGEQIGQGSCGTVYHGLWYGSDVAIKVFSKQEYSEDALLSFRQEVSLMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRSTSKLDWRRRIHMALDIARGMNYLHNCSPPIIHRDLKSSNLLVDKNWTVKVADFGLSRVKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVTLWELATQKIPWEHLNSMQVIGAVGFMNQRLDMPKDVDPRWASIIESCWQSDPQSRPTFQELLEKLKDFQRQYAIQFQAARVASADGAQKEL*

Click here to download the sequence:
Link to NCBI Protein BLAST