Transcript Information: S_Transcript_53142.p1


Annotated TAIR IDAT1G15740.1
Annotated Gene NameLeucine-rich repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5411509-5414544 | Forward length=585
E-Value2.9E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.807075250613
Replicate 261.53657569355
Replicate 361.716505388193
Condition 2: 8 Hour
Replicate 1120.18013639565
Replicate 2130.12060157624
Replicate 3122.50191936839
Condition 3: 24 Hour
Replicate 183.760652661224
Replicate 265.806970962647
Replicate 368.980772047727


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53142.p1 GENE.S_Transcript_53142~~S_Transcript_53142.p1 ORF type:5prime_partial len:332 (+),score=70.23,LRR_8|PF13855.2|6.4e-08,LRR_8|PF13855.2|5.4e-06,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.00037,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|1.8e-06,LRR_8|PF13855.2|0.76,LRR_4|PF12799.3|0.0053,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|2.8e-05,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.022 S_Transcript_53142:3-998(+)
TTGAAAGCTCTTTCAGATCTTACCAGCTTGAGGGAGTTGCAAGTCTCTTGCAGCAGCATTACGGATATTGGAGTTTCTCATCTCAAAGGATTGCAAAATCTTATTTTGCTGAACCTGGAAGGTTGCCAGCTCACTGGTGCATGTTTGGATTCTATTTCAGCTCTGGTGGCTCTGGCATATTTAAATCTTTGCAGATGTGGCCTGTCTGATCATGGGTTTGACAAGCTTTCTGGACTTAACAATTTGAAGGTGCTGAATCTGGCATTCAACAACATGTCAGATGCGTGTTTAGCATATGTCAAAGGTTTATCAAGTTTGGAGACCCTAAACTTGGATTCCTGTAGGATTCGTGATGAAGGCCTTGCTAACCTGTCAGGACTTCTGCAATTGAAACATTTGGAGTTGTCTGATACTGAAGTTGGAAGCAATGGGCTACGTTATCTATCTGGGCTAACAAACCTTGAGAGCATCAATTTGTCTTTTACTTCGGTAACTGATGCTGGTTTAAAGAAGCTCTCGGGTTTAACTTCTCTGAAGTCGCTAAATCTTGATGCTCGCAACATTACCGATGTTGGGCTAGCTGCTTTGACAGGTCTCACTGTGTTGACTCATCTGGATCTTTTTGGGGCACGGATATCAGACTCAGGAACACAGTTTTTGCGCTATTTGAAGAATCTCCAGTCTCTAGAAATATGTGGTGGAGGCTTAACAGATGCAGGTGTAAAGAATCTCAAAGATCTCACTTCATTGACACTTCTTAATCTGTCTCAGAACGGGCAGCTTACCAACAGGACCCTGGAACTGGTTTCTGGATTGACTGCCTTGGTTTCTTTGAATGTATCGAATTCTCGTATTACAAACGATGGGTTGCAATACTTGAAGCCTCTGAAGAACTTGCATTCATTGTCCTTGGAATCCTGCAAGGTGACCGCGGCTGAAATAAAGAAGCTTCAGGTCACTGCCCTCCCAAATCTTGTCAGTTTCCGTCCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53142.p1 GENE.S_Transcript_53142~~S_Transcript_53142.p1 ORF type:5prime_partial len:332 (+),score=70.23,LRR_8|PF13855.2|6.4e-08,LRR_8|PF13855.2|5.4e-06,LRR_8|PF13855.2|0.00013,LRR_8|PF13855.2|0.00037,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|1.8e-06,LRR_8|PF13855.2|0.76,LRR_4|PF12799.3|0.0053,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|2.8e-05,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.022 S_Transcript_53142:3-998(+)
LKALSDLTSLRELQVSCSSITDIGVSHLKGLQNLILLNLEGCQLTGACLDSISALVALAYLNLCRCGLSDHGFDKLSGLNNLKVLNLAFNNMSDACLAYVKGLSSLETLNLDSCRIRDEGLANLSGLLQLKHLELSDTEVGSNGLRYLSGLTNLESINLSFTSVTDAGLKKLSGLTSLKSLNLDARNITDVGLAALTGLTVLTHLDLFGARISDSGTQFLRYLKNLQSLEICGGGLTDAGVKNLKDLTSLTLLNLSQNGQLTNRTLELVSGLTALVSLNVSNSRITNDGLQYLKPLKNLHSLSLESCKVTAAEIKKLQVTALPNLVSFRPE*

Click here to download the sequence:
Link to NCBI Protein BLAST