Transcript Information: S_Transcript_531473.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36168507471336
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.18576894734711
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_531473.p1 GENE.S_Transcript_531473~~S_Transcript_531473.p1 ORF type:internal len:122 (+),score=12.67,NMD3|PF04981.9|5.1e-37 S_Transcript_531473:1-363(+)
CCGCATAGCAAGCGGCTAAAGGTGAAGCTGACAGTGCAGTCAGAGGTGATGAGCGGCGCGGTGCTGCAGCAGACGTTCGTGGTGGAGTTCGTGGTGGAGTGGAACATGTGCCTCGACTGCAACCGCGCCAACACCAAGGTGGATGCGTGGAAGGCGGTGGTGCAGGTGAGGCAGCACGCGGGCCACAAGCGCACCTTCATGTTCCTTGAGCAGCTCATCCTCAAGCACAGCGCGCATGAGCAGTGCACCAACATCAAGGAGATCCACGAGGGCATCGACTTCTTCTTTGGCAACCGCGCCCATGGCCAGAAGTTTGTGGACTTCCTGCAGTGGTGCCCTGTCACTTCCGCCACGACAAGCAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_531473.p1 GENE.S_Transcript_531473~~S_Transcript_531473.p1 ORF type:internal len:122 (+),score=12.67,NMD3|PF04981.9|5.1e-37 S_Transcript_531473:1-363(+)
PHSKRLKVKLTVQSEVMSGAVLQQTFVVEFVVEWNMCLDCNRANTKVDAWKAVVQVRQHAGHKRTFMFLEQLILKHSAHEQCTNIKEIHEGIDFFFGNRAHGQKFVDFLQWCPVTSATTSS

Click here to download the sequence:
Link to NCBI Protein BLAST