Transcript Information: S_Transcript_53200.p1


Annotated TAIR IDAT1G63780.1
Annotated Gene NameRibosomal RNA processing Brix domain protein
Annotated Gene Symbol(s)IMP4
Annotation TypeOrtholog
Chromosome Positionchr1:23665045-23667243 | Reverse length=294
E-Value9.6E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.186051957297
Replicate 218.835918975973
Replicate 314.992564367281
Condition 2: 8 Hour
Replicate 117.118340526678
Replicate 215.29503937614
Replicate 314.283067952998
Condition 3: 24 Hour
Replicate 112.111278942064
Replicate 213.567451828018
Replicate 310.981026135561


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53200.p1 GENE.S_Transcript_53200~~S_Transcript_53200.p1 ORF type:complete len:294 (+),score=51.83,Brix|PF04427.14|4.8e-36 S_Transcript_53200:191-1072(+)
ATGTTGAGAAGGAACCAAAGGTTGAGGAGAGAGTACATCTACAGAAAGAACTTAGAAGGCAAAGAACGCTTGCTTTACGAGAAGAAACGCAAAATCCGTGAAGCCCTTGAAGAGGGGAAGCCAATACCTACTGAATTGAGGAATGAAGAAGCTGCCCTTCGCCAAGAAATCGATCTCGAAGATGACCATACTGCCATTCCCAGATCACTCATTGACGATGAGTATGCCAAGGCAACTGAAAGAGAGCCAAAGATTCTTATAACAACATCAAGGGATCCGAGTCAGCCCCTTACACAGTTTGCAAAGGAGTTGAAGTTTGTTTTCCCAAATGCAGAGCGAATGAATAGAGGTGGCCAGATTATTAATGAGATTATCGAGTCTTGCCGTGCTCGTGAATTTACGGATGTCGTCCTTGTTCATGAACACCGTGGTGTGCCTGATGGCCTAATTATTAGTCATTTACCTTTGGGTCCAACTGCCTACTTTGGATTATACAATGTGGTTACCAGACATGATATTAAGGATAAGAACACGATTGGAACTATGCCTGGGGTTTATCCACATCTGGTACTTAATAATTTCACAACCAAGCTAGGGGAAAGGACAGCAACCATCCTTAAGCATTTGTTTCCTGTTCCGAAGCCAGATTCAAAGCGAATAATTACCTTCGCTAATCAGTCTGATTACATTTCATTCAGGCATCATGTTTATGAAAAACAAGGGGGTCCAAAATCAATTGAGCTAAAGGAGATTGGTCCTCGTTTTGAGCTGCGATTATATCAGATTAAACTAGGAACAGTGGAGCAGAAAGAAGCCCAGAATGAATGGGTACTCAGACCCTACATGAACACAACTAAGAAAAGGCAGTTTCTTGGGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53200.p1 GENE.S_Transcript_53200~~S_Transcript_53200.p1 ORF type:complete len:294 (+),score=51.83,Brix|PF04427.14|4.8e-36 S_Transcript_53200:191-1072(+)
MLRRNQRLRREYIYRKNLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDDHTAIPRSLIDDEYAKATEREPKILITTSRDPSQPLTQFAKELKFVFPNAERMNRGGQIINEIIESCRAREFTDVVLVHEHRGVPDGLIISHLPLGPTAYFGLYNVVTRHDIKDKNTIGTMPGVYPHLVLNNFTTKLGERTATILKHLFPVPKPDSKRIITFANQSDYISFRHHVYEKQGGPKSIELKEIGPRFELRLYQIKLGTVEQKEAQNEWVLRPYMNTTKKRQFLGD*

Click here to download the sequence:
Link to NCBI Protein BLAST