Transcript Information: S_Transcript_53218.p1


Annotated TAIR IDAT5G18130.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5995634-5997165 | Forward length=280
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.726035026995
Replicate 211.411787702163
Replicate 312.860451981668
Condition 2: 8 Hour
Replicate 131.620406332301
Replicate 236.943550818859
Replicate 330.871227565835
Condition 3: 24 Hour
Replicate 120.170946058365
Replicate 216.411725624252
Replicate 315.655062044555


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53218.p1 GENE.S_Transcript_53218~~S_Transcript_53218.p1 ORF type:complete len:261 (+),score=90.45 S_Transcript_53218:155-937(+)
ATGGACCTTCATGAGTGGGAGCTTCTTCCAAGTGATGGTTTCATTGATCTTCATGAAGATGATGGGGTTATCAACAAAAACAATATATCACCATCATCAAACCCAAATAGTGTGATTGACATGAATTATTTCCAAAAATTTGTTGATCCAAAAAAGAAGGTGAAGATCAATAGAAACTCTGTTCCTGTGGTGCCAATAAAGTTTGATGATGGTGATCAACAAGAAGAGGAGGTTGTTCCTGAGAAGGAAATACCAGAAGATCAAAGCTTGCCACCTCCAAAAAAGTTGGAAAAAACTGATGTTTCCCAACAAGTATTCTTCAAGAAGTTGAAGGAAAATGAATTTGCCGACATGAAAATGGACTCCCCCAAGTCCTCAAACAGGGGATTTGTGCCCCAATTTGATGTTGTGCGTACCTATCAATTTGAGGAAAACATTGAAAAAGAAGATCAAAAACCCACCACCAACAACAAAAATGAAAAGGGGTCAAATTTGAACAGCAAGGAAGATCAAGTTGATTGGGAGCTTGATGATCATGGTGATGATGTTGGTAATGGTGGGTTGAATGTTTGGAAATGGGCAATGACTGGAATTGGGGCATTTTTGTCATTTGGTTTTGCTGCTGCTACTGTTTCTCTTATTGTTTTGGGTAACCGCCATAAAGATCAACACCACCATAAGTCCCCTGAAGTTCACTTCCAAATCTATGCTCATGAGAAGGTTTTTCTTTCTTTCTTTCTTTTTTCCTCTGCTCTTAATCAAATTTGTGCTTACCCAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53218.p1 GENE.S_Transcript_53218~~S_Transcript_53218.p1 ORF type:complete len:261 (+),score=90.45 S_Transcript_53218:155-937(+)
MDLHEWELLPSDGFIDLHEDDGVINKNNISPSSNPNSVIDMNYFQKFVDPKKKVKINRNSVPVVPIKFDDGDQQEEEVVPEKEIPEDQSLPPPKKLEKTDVSQQVFFKKLKENEFADMKMDSPKSSNRGFVPQFDVVRTYQFEENIEKEDQKPTTNNKNEKGSNLNSKEDQVDWELDDHGDDVGNGGLNVWKWAMTGIGAFLSFGFAAATVSLIVLGNRHKDQHHHKSPEVHFQIYAHEKVFLSFFLFSSALNQICAYPV*

Click here to download the sequence:
Link to NCBI Protein BLAST