Transcript Information: S_Transcript_53222.p1


Annotated TAIR IDAT5G18130.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5995634-5997165 | Forward length=280
E-Value8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.895352408602
Replicate 253.817447384938
Replicate 357.897017919589
Condition 2: 8 Hour
Replicate 1144.17487096547
Replicate 2130.39591778583
Replicate 3126.82929324964
Condition 3: 24 Hour
Replicate 181.13813867935
Replicate 255.607280546252
Replicate 363.685662122918


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_53222.p1 GENE.S_Transcript_53222~~S_Transcript_53222.p1 ORF type:complete len:280 (+),score=96.07 S_Transcript_53222:100-939(+)
ATGGACCTTCATGAATGGGAGCTTCTTCCAAGTGATGGGTTCATTGATCTTCATGAAGATGATGGGGTTATCAACAAAAACAATATATCACCATCATCAAACCCAAATAGTGTGATTGACATGAATTATTTCCAAAAATTTGTTGATCCAAAAAAGAAGGTGAAGATCAATAGAAACTCTGTTCCTGTGGTGCCAATAAAGTTTGATGATGGTGATCAACAAGAAGAGGAGGTTGTTCCTGAGAAGGAAATACCAGAAGATCAAAGCTTGCCACCTCCAAAAAAGTTGGAAAAAACTGATGTTTCCCAACAAGTATTCTTCAAGAAGTTGAAGGAAAATGAATTTGCCGACATGAAAATGGACTCCCCCAAGTCCTCAAACAGGGGATTTGTGCCCCAATTTGATGTTGTGCGTACCTATCAATTTGAGGAAAACATTGAAAAAGAAGATCAAAAACCCATCACCAATAACAAAAATGAAAAGGGGTCAAATTTGAACAGCAAGGAAGATCAAGTTGATTGGGAGCTTGATGATCATGGTGATGATGTTGGTAATGGTGGGTTGAATGTTTGGAAATGGGCAATGACTGGAATTGGGGCATTTTTGTCATTTGGTTTTGCTGCTGCTACTGTTTCTCTTATTGTTTTGGGTAACCGCCATAAAGATCAACACCACCATAAGTCCCCTGAAGTTCACTTCCAAATCTATGCTCATGAGAAGAGGATGAAGCAAGTGGTGCACCATGCCAAAAAGCTAAATGATGCAATTACAGCAGTTAGAGGGGCTCCCTTGACATCAAGAGCTCACATCACCATTGGTGGATACTATGAAGGTCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_53222.p1 GENE.S_Transcript_53222~~S_Transcript_53222.p1 ORF type:complete len:280 (+),score=96.07 S_Transcript_53222:100-939(+)
MDLHEWELLPSDGFIDLHEDDGVINKNNISPSSNPNSVIDMNYFQKFVDPKKKVKINRNSVPVVPIKFDDGDQQEEEVVPEKEIPEDQSLPPPKKLEKTDVSQQVFFKKLKENEFADMKMDSPKSSNRGFVPQFDVVRTYQFEENIEKEDQKPITNNKNEKGSNLNSKEDQVDWELDDHGDDVGNGGLNVWKWAMTGIGAFLSFGFAAATVSLIVLGNRHKDQHHHKSPEVHFQIYAHEKRMKQVVHHAKKLNDAITAVRGAPLTSRAHITIGGYYEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST